RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 SCD5Q86SK9 330 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CCAR2Q8N163 923 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ZNF276Q8N554 614 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RNF10Q8N5U6 811 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 STKLD1Q8NE28 680 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 VN1R2Q8NFZ6 395 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CLEC4CQ8WTT0 213 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ATRIPQ8WXE1 791 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RFFLQ8WZ73 363 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GAS2L1Q99501 681 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 NUP85Q9BW27 656 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 LRRC3Q9BY71 257 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TSGA10Q9BZW7 698 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CTTNBP2NLQ9P2B4 639 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 UXTQ9UBK9 157 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CHORDC1Q9UHD1 332 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 MAGED2Q9UNF1 606 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TFR2Q9UP52 801 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 COG5Q9UP83 839 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DUSP10Q9Y6W6 482 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RANBP2P49792 3224 aaKnown RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 COL4A4P53420 1690 aaPredicted RBP9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CHD9Q3L8U1 2897 aa9.61□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GREB1Q4ZG55 1949 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GOLGA6L9A6NEM1 432 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CCL16O15467 120 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ATMINO43313 823 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 HSF2BPO75031 334 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 XYLBO75191 536 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RFPL2O75678 378 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FGF19O95750 216 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ABL1P00519 1130 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 LTFP02788 710 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FYNP06241 537 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 IGFBP4P22692 258 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RFC1P35251 1148 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 NOP2P46087 812 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 EPHA5P54756 1037 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RBM10P98175 930 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 COL19A1Q14993 1142 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FAM102AQ5T9C2 384 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 BSPRYQ5W0U4 402 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 BTBD8Q5XKL5 378 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ANKRD54Q6NXT1 300 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DCUN1D2Q6PH85 259 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DEFB106AQ8N104 65 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 LEMD2Q8NC56 503 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 JOSD2Q8TAC2 188 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GOLGA1Q92805 767 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FBXO32Q969P5 355 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ZNF707Q96C28 371 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FAM161BQ96MY7 647 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 SLITRK1Q96PX8 696 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 SLC2A13Q96QE2 648 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DDX23Q9BUQ8 820 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TRIM62Q9BVG3 475 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 IL21Q9HBE4 155 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 POPDC2Q9HBU9 364 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TLR8Q9NR97 1041 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 METTL5Q9NRN9 209 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ABCC13Q9NSE7 274 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TRMT1Q9NXH9 659 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 CLIC5Q9NZA1 410 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TRPM5Q9NZQ8 1165 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 LCMT1Q9UIC8 334 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 SALL4Q9UJQ4 1053 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 PATJQ8NI35 1801 aa9.6□□□□□ -0.87
CDK5RAP3-220ENST00000581160 A0A1W2PQH9 124 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ZNF840PA6NDX5 716 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 C2CD4BA6NLJ0 364 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 LINC01565O15544 149 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 DAB1O75553 588 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GRAP2O75791 330 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GJB6O95452 261 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GLP2RO95838 553 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 PDGFRAP16234 1089 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 GPD1P21695 349 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 NOS2P35228 1153 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 MATKP42679 507 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 PGFP49763 221 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RNASE9P60153 205 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 RPL7AP62424 266 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ACAP1Q15027 740 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 IFI16Q16666 785 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ARHGAP29Q52LW3 1261 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 HFE2Q6ZVN8 426 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 TMC8Q8IU68 726 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 HS6ST3Q8IZP7 471 aa9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 C12orf76Q8N812 135 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 ZNF564Q8TBZ8 553 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-220ENST00000581160 FNIP1Q8TF40 1166 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms