RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SMOQ99835 787 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 MMP17Q9ULZ9 603 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
SMARCE1-216ENST00000580419 EPG5Q9HCE0 2579 aa15.33■□□□□ 0.05
SMARCE1-216ENST00000580419 GON4LQ3T8J9 2241 aa15.33■□□□□ 0.05
SMARCE1-216ENST00000580419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 FAM200BP0CF97 657 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 MBL2P11226 248 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 GRIA2P42262 883 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 PI4KAP42356 2102 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 GAD2Q05329 585 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 SPEM2Q0P670 501 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 NUDT18Q6ZVK8 323 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 ETFBKMTQ8IXQ9 262 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 SCAMP5Q8TAC9 235 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 STARD13Q9Y3M8 1113 aa15.33■□□□□ 0.04
SMARCE1-216ENST00000580419 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CETN3O15182 167 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 PMM2O15305 246 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 TLR5O60602 858 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 ADH5P11766 374 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 PPP1R2P41236 205 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 NUCB2P80303 420 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CRY1Q16526 586 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 PLK5Q496M5 336 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 PHTF2Q8N3S3 785 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CYFIP2Q96F07 1278 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 CHORDC1Q9UHD1 332 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
SMARCE1-216ENST00000580419 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 KAT7O95251 611 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 ABL1P00519 1130 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 APODP05090 189 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 ATP5C1P36542 298 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 GCLMP48507 274 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 KIF11P52732 1056 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 GOLGA8FQ08AF8 430 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 GOLGA8DPQ0D2H9 430 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 BECN1Q14457 450 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 ELF2Q15723 593 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 SCARA5Q6ZMJ2 495 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 C12orf29Q8N999 325 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 DUSP16Q9BY84 665 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 SPHK2Q9NRA0 654 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 VPS45Q9NRW7 570 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
SMARCE1-216ENST00000580419 GREM1O60565 184 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 BEST1O76090 585 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 CCDC130P13994 396 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 MXI1P50539 228 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 MAP3K7CLP57077 242 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 USP39Q53GS9 565 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 ARHGAP17Q68EM7 881 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 TSTD1Q8NFU3 115 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 DUSP15Q9H1R2 295 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
SMARCE1-216ENST00000580419 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms