RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IFRD2Q12894 506 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-214ENST00000580073 BIRC3Q13489 604 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 HECTD3Q5T447 861 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 C12orf56Q8IXR9 622 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 ELOA2Q8IYF1 753 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-214ENST00000580073 CCDC127Q96BQ5 260 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 FAM84AQ96KN4 292 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 MRPL45Q9BRJ2 306 aaKnown RBP14.18□□□□□ -0.14
TRAF4-214ENST00000580073 MED10Q9BTT4 135 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 LINC00597Q9H2U6 94 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 DMAP1Q9NPF5 467 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-214ENST00000580073 SMPD4Q9NXE4 827 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 CHD8Q9HCK8 2581 aa14.18□□□□□ -0.14
TRAF4-214ENST00000580073 TMEM8BA6NDV4 472 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 TNFRSF10BO14763 440 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 TGFB1I1O43294 461 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 AP5Z1O43299 807 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 EXOC3O60645 756 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 KLF8O95600 359 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 BMP6P22004 513 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 KDSRQ06136 332 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 CAMK4Q16566 473 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF699Q32M78 642 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 SLC36A4Q6YBV0 504 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 NELFCDQ8IXH7 590 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 ADGRG2Q8IZP9 1017 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 CCDC33Q8N5R6 958 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 ALLCQ8N6M5 410 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 TXNDC5Q8NBS9 432 aaKnown RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 PIGKQ92643 395 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 FBXO44Q9H4M3 255 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 SLC32A1Q9H598 525 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 VRTNQ9H8Y1 702 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 EXOC1Q9NV70 894 aa14.17□□□□□ -0.14
TRAF4-214ENST00000580073 POLR3BQ9NW08 1133 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 NXF1Q9UBU9 619 aaKnown RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 ASCC3Q8N3C0 2202 aaKnown RBP14.17□□□□□ -0.14
TRAF4-214ENST00000580073 HOXC11O43248 304 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-214ENST00000580073 TIE1P35590 1138 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 P2RY2P41231 377 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 ATXN3P54252 364 aaPredicted RBP14.16□□□□□ -0.14
TRAF4-214ENST00000580073 BMT2Q1RMZ1 405 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 TRIM61Q5EBN2 209 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 ISM2Q6H9L7 571 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 FAM35AQ86V20 835 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 SYT12Q8IV01 421 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 IL17RCQ8NAC3 791 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 CEP76Q8TAP6 659 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 RNF38Q9H0F5 515 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 DEC1Q9P2X7 70 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 LSM7Q9UK45 103 aaKnown RBP14.16□□□□□ -0.14
TRAF4-214ENST00000580073 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
TRAF4-214ENST00000580073 USP24Q9UPU5 2620 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 A0A0A0MRY4 1105 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 TCRBV21S2A2A0A5A6 115 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 CLIC2O15247 247 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 PROS1P07225 676 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 RDXP35241 583 aaKnown RBP14.15□□□□□ -0.14
TRAF4-214ENST00000580073 SLC5A3P53794 718 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 ZXDBP98169 803 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 GAB4Q2WGN9 574 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 SNX30Q5VWJ9 437 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 LYSMD4Q5XG99 296 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 SDE2Q6IQ49 451 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 UNQ6494/PRO21346Q6UXR6 183 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 TADA2BQ86TJ2 420 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
TRAF4-214ENST00000580073 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 XPO6Q96QU8 1125 aaKnown RBP14.15□□□□□ -0.14
TRAF4-214ENST00000580073 KCTD10Q9H3F6 313 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 DPEP3Q9H4B8 488 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 CLSTN2Q9H4D0 955 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRAF4-214ENST00000580073 TLR8Q9NR97 1041 aaKnown RBP14.15□□□□□ -0.14
TRAF4-214ENST00000580073 KRT82Q9NSB4 513 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 MAPK8IP1Q9UQF2 711 aa14.15□□□□□ -0.14
TRAF4-214ENST00000580073 LAMA1P25391 3075 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 TBC1D3BA6NDS4 549 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 SGK1O00141 431 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 COCHO43405 550 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 ZNF217O75362 1048 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 CST3P01034 146 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-214ENST00000580073 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
TRAF4-214ENST00000580073 BCKDHBP21953 392 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 KIR2DL1P43626 348 aaPredicted RBP14.14□□□□□ -0.15
TRAF4-214ENST00000580073 MYL6P60660 151 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 FOXC1Q12948 553 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 E2F5Q15329 346 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 KNOP1Q1ED39 458 aaKnown RBP14.14□□□□□ -0.15
TRAF4-214ENST00000580073 RHBDF2Q6PJF5 856 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 HDDC3Q8N4P3 179 aa14.14□□□□□ -0.15
TRAF4-214ENST00000580073 TERB1Q8NA31 727 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms