RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 FBXO21O94952 628 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TRUB2O95900 331 aaKnown RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TCF4P15884 667 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 MIPP30301 263 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 FLT3P36888 993 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 PTPN9P43378 593 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 TNNT3P45378 269 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 YWHAHQ04917 246 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 SIX1Q15475 284 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 FAM171BQ6P995 826 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 EMBQ6PCB8 327 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 CCDC137Q6PK04 289 aaKnown RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 CLEC20AQ6ZU45 233 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 NPAS4Q8IUM7 802 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 HERC6Q8IVU3 1022 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 CCDC105Q8IYK2 499 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 GRK7Q8WTQ7 553 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 HLA-CQ95604 372 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 VWCEQ96DN2 955 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 PCED1BQ96HM7 432 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 HINFPQ9BQA5 517 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 ACBD3Q9H3P7 528 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 FAM114A2Q9NRY5 505 aa17.73■□□□□ 0.43
SREBF1-218ENST00000578469 ARIH1Q9Y4X5 557 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-218ENST00000578469 SCN5AQ14524 2016 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 PI4K2BG5E9Z4 385 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 RFXAPO00287 272 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 HSF2BPO75031 334 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 ADIGQ0VDE8 80 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 ATP13A4Q4VNC1 1196 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 BOLA3Q53S33 107 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 TFDP3Q5H9I0 405 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 MFSD7Q6UXD7 560 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 ZDHHC14Q8IZN3 488 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 ARFGAP1Q8N6T3 406 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 CASKIN2Q8WXE0 1202 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 MYLPFQ96A32 169 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 PIWIL1Q96J94 861 aaKnown RBP17.72■□□□□ 0.43
SREBF1-218ENST00000578469 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 RTP3Q9BQQ7 232 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 HEMGNQ9BXL5 484 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 FUT8Q9BYC5 575 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 PLEKHA4Q9H4M7 779 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 KLHL11Q9NVR0 708 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.72■□□□□ 0.43
SREBF1-218ENST00000578469 PCSK1NQ9UHG2 260 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 USP18Q9UMW8 372 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 EFR3BQ9Y2G0 817 aa17.72■□□□□ 0.43
SREBF1-218ENST00000578469 SYN3O14994 580 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TLL1O43897 1013 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 ALDH2P05091 517 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 GBP1P32455 592 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 PTGIRP43119 386 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 CARSP49589 748 aaKnown RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 KLF1Q13351 362 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 NNTQ13423 1086 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 LLGL1Q15334 1064 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TAF5Q15542 800 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 CCNG2Q16589 344 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TMEM31Q5JXX7 168 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 C4orf50Q6ZRC1 276 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 SYDE1Q6ZW31 735 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 JAMLQ86YT9 394 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 KCTD6Q8NC69 237 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 FAM172AQ8WUF8 416 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 RAPGEF5Q92565 580 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 KHSRPQ92945 711 aaKnown RBP eCLIP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TBCBQ99426 244 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 ERP44Q9BS26 406 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 DCLK3Q9C098 648 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 NRDE2Q9H7Z3 1164 aa17.71■□□□□ 0.43
SREBF1-218ENST00000578469 NGRNQ9NPE2 291 aaKnown RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-218ENST00000578469 hCG_1818297A0A087WSY0 165 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 BHMG1C9JSJ3 638 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 DAB1O75553 588 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 BEST1O76090 585 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 ECEL1O95672 775 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 ITGB1P05556 798 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 KDELR1P24390 212 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CDKN2BP42772 138 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 TKTL1P51854 596 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 ATP11AP98196 1134 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 LMNB2Q03252 620 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 IKBKEQ14164 716 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CASP8Q14790 479 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CDO1Q16878 200 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 CCDC142Q17RM4 750 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 C15orf59Q2T9L4 293 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-218ENST00000578469 KAZNQ674X7 775 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 TRNP1Q6NT89 227 aa17.7■□□□□ 0.42
SREBF1-218ENST00000578469 SCYL2Q6P3W7 929 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms