RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 TRIM33Q9UPN9 1127 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 A8MXQ7 604 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 GPR32O75388 356 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SDC4P31431 198 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 KCNJ2P63252 427 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ELF3P78545 371 aaPredicted RBP18.3■□□□□ 0.52
ERBB2-205ENST00000578199 RNASELQ05823 741 aaKnown RBP18.3■□□□□ 0.52
ERBB2-205ENST00000578199 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 KIF2BQ8N4N8 673 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ANKLE1Q8NAG6 615 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 FAF2Q96CS3 445 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 SNX27Q96L92 541 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 ACSS3Q9H6R3 686 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 GOLGA2P5Q9HBQ8 144 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 PCDH18Q9HCL0 1135 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 KIAA1257Q9ULG3 409 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 NR2E3Q9Y5X4 410 aa18.3■□□□□ 0.52
ERBB2-205ENST00000578199 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 STRNO43815 780 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
ERBB2-205ENST00000578199 HDAC4P56524 1084 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 GALNTL6Q49A17 601 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 SLC27A1Q6PCB7 646 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 ADGRD1Q6QNK2 874 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 ZNF410Q86VK4 478 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 DCAKDQ8WVC6 231 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-205ENST00000578199 TINF2Q9BSI4 451 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 ALG13Q9NP73 1137 aaKnown RBP18.29■□□□□ 0.52
ERBB2-205ENST00000578199 LCP1P13796 627 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 ADRA1DP25100 572 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 STIP1P31948 543 aaKnown RBP18.29■□□□□ 0.52
ERBB2-205ENST00000578199 MSH2P43246 934 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 BCAR1P56945 870 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 NCALDP61601 193 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 ZBTB6Q15916 424 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 TMEM110Q86TL2 294 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 SLC4A5Q9BY07 1137 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 KLHL14Q9P2G3 628 aa18.29■□□□□ 0.52
ERBB2-205ENST00000578199 SPTLC1O15269 473 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 RECQL4O94761 1208 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 GSTA1P08263 222 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 YWHAGP61981 247 aaKnown RBP eCLIP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 ZNF200P98182 395 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TFDP2Q14188 446 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 KCNJ11Q14654 390 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 HHATQ5VTY9 493 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 PRPF39Q86UA1 669 aaKnown RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TMEM40Q8WWA1 233 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 NDRG1Q92597 394 aaKnown RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TRIM6Q9C030 488 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 GEMIN8Q9NWZ8 242 aaKnown RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 SLC17A7Q9P2U7 560 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 HESX1Q9UBX0 185 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 SMG5Q9UPR3 1016 aaKnown RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TCRBV9S1A1TA0A576 114 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 NDC80O14777 642 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 FAM155BO75949 473 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 DCAF4L1Q3SXM0 396 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 FAM47CQ5HY64 1035 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 NT5DC4Q86YG4 428 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 MAP7D3Q8IWC1 876 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 NETO2Q8NC67 525 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 CCDC110Q8TBZ0 833 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TCP10LQ8TDR4 215 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 MZB1Q8WU39 189 aa18.28■□□□□ 0.52
ERBB2-205ENST00000578199 TRIM56Q9BRZ2 755 aaKnown RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
ERBB2-205ENST00000578199 APOL1O14791 398 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.52
ERBB2-205ENST00000578199 BNIP1Q12981 228 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 BOLA3Q53S33 107 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 LRRC8CQ8TDW0 803 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 DNAJB3Q8WWF6 145 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 CFAP36Q96G28 342 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 DHRS4Q9BTZ2 278 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 RXFP1Q9HBX9 757 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 IBSPP21815 317 aaPredicted RBP18.27■□□□□ 0.52
ERBB2-205ENST00000578199 PDK4Q16654 411 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 PTPN18Q99952 460 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 SENP1Q9P0U3 644 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 TEX264Q9Y6I9 313 aa18.27■□□□□ 0.52
ERBB2-205ENST00000578199 F5H423 210 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 APRTP07741 180 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 CYP2C9P11712 490 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 GBE1Q04446 702 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 SLC10A2Q12908 348 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 GRB14Q14449 540 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 KLHL38Q2WGJ6 581 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 ZNF467Q7Z7K2 595 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-205ENST00000578199 BEST2Q8NFU1 509 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 KBTBD7Q8WVZ9 684 aa18.26■□□□□ 0.51
ERBB2-205ENST00000578199 DHX35Q9H5Z1 703 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms