RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TPM2P07951 284 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 ARSAP15289 507 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 BRD2P25440 801 aaKnown RBP24.73■■□□□ 1.55
SNF8-217ENST00000576353 ATP5C1P36542 298 aaKnown RBP24.73■■□□□ 1.55
SNF8-217ENST00000576353 RPS9P46781 194 aaKnown RBP24.73■■□□□ 1.55
SNF8-217ENST00000576353 PLA2G4AP47712 749 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 PGFP49763 221 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 TKTL1P51854 596 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 TCF15Q12870 199 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 NR1H3Q13133 447 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 PKDCCQ504Y2 493 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 CDKAL1Q5VV42 579 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 C11orf57Q6ZUT1 292 aaPredicted RBP24.73■■□□□ 1.55
SNF8-217ENST00000576353 ECT2Q9H8V3 914 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 NMUR1Q9HB89 426 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 CLIC5Q9NZA1 410 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 NAGPAQ9UK23 515 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 RALAP11233 206 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 RARGP13631 454 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 MYL5Q02045 173 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 EML3Q32P44 896 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 CAVIN1Q6NZI2 390 aaKnown RBP24.72■■□□□ 1.55
SNF8-217ENST00000576353 GJB7Q6PEY0 223 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 KLHDC10Q6PID8 442 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 ZNF687Q8N1G0 1237 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 ZNF276Q8N554 614 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 KCTD13Q8WZ19 329 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 CDK5RAP1Q96SZ6 601 aaKnown RBP24.72■■□□□ 1.55
SNF8-217ENST00000576353 NAT10Q9H0A0 1025 aaKnown RBP24.72■■□□□ 1.55
SNF8-217ENST00000576353 LINC00597Q9H2U6 94 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.72■■□□□ 1.55
SNF8-217ENST00000576353 FANCLQ9NW38 375 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 OSER1Q9NX31 292 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 TBC1D14Q9P2M4 693 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 ANAPC1Q9H1A4 1944 aa24.72■■□□□ 1.55
SNF8-217ENST00000576353 ZNF638Q14966 1978 aaKnown RBP24.71■■□□□ 1.55
SNF8-217ENST00000576353 MUC6Q6W4X9 2439 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 E2F8A0AVK6 867 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 TULP2O00295 520 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 MED7O43513 233 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 NFATC1O95644 943 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 ZBED1O96006 694 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 PTMSP20962 102 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 TYRO3Q06418 890 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 FZD5Q13467 585 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 ARHGAP44Q17R89 818 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 PM20D1Q6GTS8 502 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 SCD5Q86SK9 330 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 ANKRD20A12PQ8NF67 263 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 SLC35F5Q8WV83 523 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 EXOC4Q96A65 974 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 ZFRQ96KR1 1074 aaKnown RBP24.71■■□□□ 1.55
SNF8-217ENST00000576353 ZSWIM1Q9BR11 485 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 SH3BP1Q9Y3L3 701 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 F5P12259 2224 aa24.71■■□□□ 1.55
SNF8-217ENST00000576353 OTOL1A6NHN0 477 aaPredicted RBP24.7■■□□□ 1.54
SNF8-217ENST00000576353 M0QYV0 167 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 TBX18O95935 607 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 USP8P40818 1118 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 APBA1Q02410 837 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 GOLGA8FQ08AF8 430 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 GOLGA8DPQ0D2H9 430 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 LRRC32Q14392 662 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 C10orf120Q5SQS8 335 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 TXNDC11Q6PKC3 985 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 C1orf210Q8IVY1 113 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 SIX6OS1Q8N1H7 587 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 SHC3Q92529 594 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 SECISBP2LQ93073 1101 aaKnown RBP24.7■■□□□ 1.54
SNF8-217ENST00000576353 FAM122AQ96E09 287 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 LMAN1LQ9HAT1 526 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 SIX2Q9NPC8 291 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 TAB2Q9NYJ8 693 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 DNMT3LQ9UJW3 386 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 DNAJC12Q9UKB3 198 aa24.7■■□□□ 1.54
SNF8-217ENST00000576353 COL4A2P08572 1712 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 COL4A3Q01955 1670 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 TICRRQ7Z2Z1 1910 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 H0Y858 1186 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 ANGPT1Q15389 498 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 MEA1Q16626 185 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 DGKKQ5KSL6 1271 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 IER2Q9BTL4 223 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 KLF16Q9BXK1 252 aaPredicted RBP24.69■■□□□ 1.54
SNF8-217ENST00000576353 ULBP1Q9BZM6 244 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 MYH10P35580 1976 aa24.69■■□□□ 1.54
SNF8-217ENST00000576353 LETM1O95202 739 aaPredicted RBP24.68■■□□□ 1.54
SNF8-217ENST00000576353 CALCAP01258 141 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 CHRNB1P11230 501 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 GJA4P35212 333 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 YWHAGP61981 247 aaKnown RBP eCLIP24.68■■□□□ 1.54
SNF8-217ENST00000576353 NHLH1Q02575 133 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 ADIGQ0VDE8 80 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 PON2Q15165 354 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 KRT31Q15323 416 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 KLHL40Q2TBA0 621 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 ADGRG2Q8IZP9 1017 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 SCML4Q8N228 414 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 ZNF606Q8WXB4 792 aa24.68■■□□□ 1.54
SNF8-217ENST00000576353 OTUB2Q96DC9 234 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms