RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ATP5OP48047 213 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 LIG3P49916 1009 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 EFTUD2Q15029 972 aaKnown RBP eCLIP24.67■■□□□ 1.544e-9■■■■■ 27.7
NPLOC4-217ENST00000574897 SAPCD2Q86UD0 394 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 CCDC33Q8N5R6 958 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 STK32AQ8WU08 396 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 MAML1Q92585 1016 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 OSBPL7Q9BZF2 842 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 ARHGAP39Q9C0H5 1083 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 CDY2AQ9Y6F7 541 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 RARBP10826 455 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 ATP5DP30049 168 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 GNASQ5JWF2 1037 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 RGMBQ6NW40 437 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 CEP128Q6ZU80 1094 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 GDAP1Q8TB36 358 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 TTC25Q96NG3 672 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 KIF9Q9HAQ2 790 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 UBN1Q9NPG3 1134 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 XPO7Q9UIA9 1087 aaKnown RBP24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 Q9Y3F1 56 aa24.67■■□□□ 1.54
NPLOC4-217ENST00000574897 BEST1O76090 585 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 AKR1A1P14550 325 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 RABGGTBP53611 331 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 SV2CQ496J9 727 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 BOLA3Q53S33 107 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 LIMS2Q7Z4I7 341 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 PCGF5Q86SE9 256 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 TAX1BP1Q86VP1 789 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 ZIC5Q96T25 663 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 DCAF8L1A6NGE4 600 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 HUS1O60921 280 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 TFDP2Q14188 446 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 LPPQ93052 612 aa24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 C11orf84Q9BUA3 381 aaPredicted RBP24.66■■□□□ 1.54
NPLOC4-217ENST00000574897 HTTP42858 3142 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 RASA4BC9J798 803 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 RASA4O43374 803 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 XPOTO43592 962 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 VIMP08670 466 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 PDK2Q15119 407 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 NBPF20Q3BBV1 942 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 BBS9Q3SYG4 887 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 FAM47CQ5HY64 1035 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 RNF187Q5TA31 235 aaPredicted RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 WSCD1Q658N2 575 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 GDF6Q6KF10 455 aaPredicted RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 SLC26A9Q7LBE3 791 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 B3GALNT2Q8NCR0 500 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 DYDC1Q8WWB3 177 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 USP29Q9HBJ7 922 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 MYO18AQ92614 2054 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 PNPLA4P41247 253 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 PKN2Q16513 984 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 SPRED3Q2MJR0 410 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 GKAP1Q5VSY0 366 aaPredicted RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 MAP7D3Q8IWC1 876 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 CACNA2D3Q8IZS8 1091 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 FUKQ8N0W3 1084 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 NME8Q8N427 588 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 CCDC185Q8N715 623 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 TEKT4Q8WW24 435 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 SOCS4Q8WXH5 440 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 PPP1R10Q96QC0 940 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 DHX35Q9H5Z1 703 aaKnown RBP24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 CCDC134Q9H6E4 229 aa24.65■■□□□ 1.54
NPLOC4-217ENST00000574897 APOL1O14791 398 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 KCNN4O15554 427 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 GNAT1P11488 350 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 RBL1P28749 1068 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 MLH1P40692 756 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 ARL4CP56559 192 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 BCAR1P56945 870 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 PITX1P78337 314 aaPredicted RBP24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 MRPS6P82932 125 aaKnown RBP24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 FAXCQ5TGI0 409 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 KIAA0319Q5VV43 1072 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 PIGZQ86VD9 579 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 FBXO36Q8NEA4 188 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 GSTCDQ8NEC7 633 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 PYROXD1Q8WU10 500 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 CABS1Q96KC9 395 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 TBCBQ99426 244 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 ST3GAL5Q9UNP4 418 aa24.64■■□□□ 1.54
NPLOC4-217ENST00000574897 CYB561D2O14569 222 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 SPAG7O75391 227 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 KIAA0754O94854 1291 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 MICALCLQ6ZW33 695 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 ZDHHC17Q8IUH5 632 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 IGDCC3Q8IVU1 814 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 OTUD6BQ8N6M0 293 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 GABRQQ9UN88 632 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 MFHAS1Q9Y4C4 1052 aa24.64■■□□□ 1.53
NPLOC4-217ENST00000574897 IBSPP21815 317 aaPredicted RBP24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 ADIGQ0VDE8 80 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 TRIM32Q13049 653 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 SLC9A4Q6AI14 798 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 PAQR9Q6ZVX9 377 aa24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 SPATS2Q86XZ4 545 aaKnown RBP24.63■■□□□ 1.53
NPLOC4-217ENST00000574897 PYROXD2Q8N2H3 581 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms