RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 SLC4A5Q9BY07 1137 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 CNGB3Q9NQW8 809 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 NUDT5Q9UKK9 219 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 CCL26Q9Y258 94 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 LUC7L2Q9Y383 392 aaKnown RBP17.09■□□□□ 0.33
PFN1-203ENST00000574872 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 ANAPC1Q9H1A4 1944 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 YJEFN3A6XGL0 299 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 E7ENQ6 273 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 COCHO43405 550 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 TLR5O60602 858 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 TBX18O95935 607 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 OAS1P00973 400 aaKnown RBP17.08■□□□□ 0.32
PFN1-203ENST00000574872 ERBB2P04626 1255 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 SKILP12757 684 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 RARGP13631 454 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 ACADSBP45954 432 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 RPL34P49207 117 aaKnown RBP17.08■□□□□ 0.32
PFN1-203ENST00000574872 DAOAP59103 153 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 YWHAGP61981 247 aaKnown RBP eCLIP17.08■□□□□ 0.32
PFN1-203ENST00000574872 ZBED6P86452 979 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 PTPN20Q4JDL3 420 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 PM20D1Q6GTS8 502 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 BHLHA9Q7RTU4 235 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 FMNL3Q8IVF7 1028 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 STK32AQ8WU08 396 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.32
PFN1-203ENST00000574872 IQCDQ96DY2 449 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 PCDHB18PQ96TA0 734 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 PLA2G2FQ9BZM2 168 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 NACA2Q9H009 215 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 RNF38Q9H0F5 515 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 SMOC2Q9H3U7 446 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 SYNCQ9H7C4 482 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 ZFP14Q9HCL3 533 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 SMPD4Q9NXE4 827 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 AIPL1Q9NZN9 384 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 ZMYM5Q9UJ78 669 aa17.08■□□□□ 0.32
PFN1-203ENST00000574872 HEPACAM2A8MVW5 462 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 DPYSL4O14531 572 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 MDM4O15151 490 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 PAPSS1O43252 624 aaPredicted RBP17.07■□□□□ 0.32
PFN1-203ENST00000574872 FBXO21O94952 628 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 LSM8O95777 96 aaKnown RBP17.07■□□□□ 0.32
PFN1-203ENST00000574872 MBL2P11226 248 aaPredicted RBP17.07■□□□□ 0.32
PFN1-203ENST00000574872 CDH5P33151 784 aaPredicted RBP17.07■□□□□ 0.32
PFN1-203ENST00000574872 NOMO3P69849 1222 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 KLHL30Q0D2K2 578 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 TRIM14Q14142 442 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 GRM2Q14416 872 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 C2CD6Q53TS8 623 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 SNX30Q5VWJ9 437 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 HFE2Q6ZVN8 426 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 TMEM110Q86TL2 294 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 ARHGAP18Q8N392 663 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
PFN1-203ENST00000574872 ELSPBP1Q96BH3 223 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 HAUS4Q9H6D7 363 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 TRPV4Q9HBA0 871 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.07■□□□□ 0.32
PFN1-203ENST00000574872 IGSF9Q9P2J2 1179 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 MYO10Q9HD67 2058 aa17.07■□□□□ 0.32
PFN1-203ENST00000574872 ECI2O75521 394 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 CYP1A1P04798 512 aaPredicted RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 RALAP11233 206 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 PSEN1P49768 467 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 TUBP50607 506 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 TDRD12Q587J7 1177 aaKnown RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 C10orf120Q5SQS8 335 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 VITQ6UXI7 678 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 TRIM72Q6ZMU5 477 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 ZNF571Q7Z3V5 609 aaPredicted RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 EDEM1Q92611 657 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 PIWIL1Q96J94 861 aaKnown RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 LRRC3BQ96PB8 259 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 COL25A1Q9BXS0 654 aaPredicted RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 NUCKS1Q9H1E3 243 aaKnown RBP17.06■□□□□ 0.32
PFN1-203ENST00000574872 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 TDP1Q9NUW8 608 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 CPQQ9Y646 472 aa17.06■□□□□ 0.32
PFN1-203ENST00000574872 SOBPA7XYQ1 873 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
PFN1-203ENST00000574872 NARSO43776 548 aaKnown RBP17.05■□□□□ 0.32
PFN1-203ENST00000574872 OLFM2O95897 454 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 TPM1P09493 284 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 PFKLP17858 780 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 TNFAIP3P21580 790 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 WEE1P30291 646 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 PRKCIP41743 596 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 CLEC16AQ2KHT3 1053 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 BSPRYQ5W0U4 402 aa17.05■□□□□ 0.32
PFN1-203ENST00000574872 OR6B2Q6IFH4 312 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms