RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 RAD54BQ9Y620 910 aa12.98□□□□□ -0.33
PRPF8-208ENST00000573716 URB1O60287 2271 aaKnown RBP12.98□□□□□ -0.33
PRPF8-208ENST00000573716 LOC400499M0QZD8 3231 aa12.98□□□□□ -0.33
PRPF8-208ENST00000573716 A0A1W2PQF6 199 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 OLFM2O95897 454 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 PRB1P04280 392 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 CYP4F3Q08477 520 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 KCNA1Q09470 495 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 GRAMD4Q6IC98 578 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 TMEM25Q86YD3 366 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 BBS7Q8IWZ6 715 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 ZCCHC9Q8N567 271 aaKnown RBP12.97□□□□□ -0.33
PRPF8-208ENST00000573716 KIAA1958Q8N8K9 716 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 ADAM32Q8TC27 787 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 IPO4Q8TEX9 1081 aaKnown RBP12.97□□□□□ -0.33
PRPF8-208ENST00000573716 SCFD1Q8WVM8 642 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
PRPF8-208ENST00000573716 FOXJ1Q92949 421 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 CRELD1Q96HD1 420 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 DCBLD2Q96PD2 775 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 NACA2Q9H009 215 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 SNX25Q9H3E2 840 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 IL21RQ9HBE5 538 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 DNAJC17Q9NVM6 304 aaKnown RBP12.97□□□□□ -0.33
PRPF8-208ENST00000573716 PCOLCE2Q9UKZ9 415 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 SHROOM3Q8TF72 1996 aa12.97□□□□□ -0.33
PRPF8-208ENST00000573716 GOLGA4Q13439 2230 aaKnown RBP12.97□□□□□ -0.33
PRPF8-208ENST00000573716 ASXL3Q9C0F0 2248 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-208ENST00000573716 COCHO43405 550 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 SLC26A4O43511 780 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 GCNT3O95395 438 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 LDHAP00338 332 aaKnown RBP12.96□□□□□ -0.33
PRPF8-208ENST00000573716 TNNC2P02585 160 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 YWHAQP27348 245 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 CACNA2D1P54289 1103 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 NOP14P78316 857 aaKnown RBP12.96□□□□□ -0.33
PRPF8-208ENST00000573716 ETFBKMTQ8IXQ9 262 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 CXorf38Q8TB03 319 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 MYCBPAPQ8TBZ2 947 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 OTUB2Q96DC9 234 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-208ENST00000573716 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 SPHK2Q9NRA0 654 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 CHORDC1Q9UHD1 332 aaPredicted RBP12.96□□□□□ -0.33
PRPF8-208ENST00000573716 HCN2Q9UL51 889 aa12.96□□□□□ -0.33
PRPF8-208ENST00000573716 A0A1B0GTW7 788 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 FAM149AA5PLN7 773 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 NEDD8-MDP1E9PL57 170 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 H3BQV1 296 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 CLDN5O00501 218 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 ATXN1LP0C7T5 689 aaKnown RBP12.95□□□□□ -0.34
PRPF8-208ENST00000573716 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
PRPF8-208ENST00000573716 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
PRPF8-208ENST00000573716 C19orf57Q0VDD7 668 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 L1TD1Q5T7N2 865 aaKnown RBP12.95□□□□□ -0.34
PRPF8-208ENST00000573716 DPH6Q7L8W6 267 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 RHBDD1Q8TEB9 315 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 MRPL45Q9BRJ2 306 aaKnown RBP12.95□□□□□ -0.34
PRPF8-208ENST00000573716 CBWD1Q9BRT8 395 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 ZDHHC5Q9C0B5 715 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 ZNF518BQ9C0D4 1074 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 GAREM1Q9H706 876 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 KIF3AQ9Y496 699 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 BPTFQ12830 3046 aa12.95□□□□□ -0.34
PRPF8-208ENST00000573716 PTPRJQ12913 1337 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 SMG1Q96Q15 3661 aaKnown RBP12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 CBFA2T3O75081 653 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 CILPO75339 1184 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 CLSTN1O94985 981 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 CER1O95813 267 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 NCAM1P13591 858 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 GARTP22102 1010 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 CD6P30203 668 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 MATKP42679 507 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 GRIN1Q05586 938 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TMPRSS7Q7RTY8 843 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 PDZD8Q8NEN9 1154 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 PIP4K2CQ8TBX8 421 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 BHMTQ93088 406 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 WBP2Q969T9 261 aa12.94□□□□□ -0.34
PRPF8-208ENST00000573716 TOE1Q96GM8 510 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms