RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 MMRN2Q9H8L6 949 aa16■□□□□ 0.15
RAB40B-203ENST00000570676 FBRSL1Q9HCM7 1045 aaKnown RBP16■□□□□ 0.15
RAB40B-203ENST00000570676 DMAP1Q9NPF5 467 aaPredicted RBP16■□□□□ 0.15
RAB40B-203ENST00000570676 IFNKQ9P0W0 207 aa16■□□□□ 0.15
RAB40B-203ENST00000570676 EP300Q09472 2414 aaPredicted RBP16■□□□□ 0.15
RAB40B-203ENST00000570676 LGALS16A8MUM7 142 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 LEFTY2O00292 366 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 AP5Z1O43299 807 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 STX10O60499 249 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 RTN3O95197 1032 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-203ENST00000570676 EGFP01133 1207 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 AFPP02771 609 aaKnown RBP15.99■□□□□ 0.15
RAB40B-203ENST00000570676 SLC5A3P53794 718 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 UNC93AQ86WB7 457 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 CRYBG2Q8N1P7 616 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 TTC16Q8NEE8 873 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 EZH1Q92800 747 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-203ENST00000570676 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
RAB40B-203ENST00000570676 SLITRK1Q96PX8 696 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 SMOQ99835 787 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 NDST4Q9H3R1 872 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■■■■■ 111.8
RAB40B-203ENST00000570676 IL37Q9NZH6 218 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 CPQQ9Y646 472 aa15.99■□□□□ 0.15
RAB40B-203ENST00000570676 MYOFQ9NZM1 2061 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 FAM92AA1XBS5 289 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 CBFA2T2O43439 604 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 AP1G2O75843 785 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 BEST1O76090 585 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 YWHAQP27348 245 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 NRLP54845 237 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAB40B-203ENST00000570676 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 SCAMP5Q8TAC9 235 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 SLC2A14Q8TDB8 520 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 OVCA2Q8WZ82 227 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 FBXO32Q969P5 355 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 P2RY13Q9BPV8 354 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 XPO4Q9C0E2 1151 aaKnown RBP15.98■□□□□ 0.15
RAB40B-203ENST00000570676 NIF3L1Q9GZT8 377 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 LINC00597Q9H2U6 94 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 TMEM8AQ9HCN3 771 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 CSNK1G1Q9HCP0 422 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
RAB40B-203ENST00000570676 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
RAB40B-203ENST00000570676 CFAP54Q96N23 3096 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 CHURC1-FNTBB4DL54 471 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 RNF40O75150 1001 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 CILPO75339 1184 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 TPM3P06753 285 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 GTF2H1P32780 548 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 FMO5P49326 533 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 FNTBP49356 437 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 GALK1P51570 392 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 AMPD2Q01433 879 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 UBXN1Q04323 297 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 GAB4Q2WGN9 574 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 FKBP15Q5T1M5 1219 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 KIAA2013Q8IYS2 634 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 C12orf29Q8N999 325 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 WHAMMQ8TF30 809 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 CD101Q93033 1021 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 ZFRQ96KR1 1074 aaKnown RBP15.97■□□□□ 0.15
RAB40B-203ENST00000570676 HINFPQ9BQA5 517 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 IMPG2Q9BZV3 1241 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 SMPD4Q9NXE4 827 aa15.97■□□□□ 0.15
RAB40B-203ENST00000570676 ZNF292O60281 2723 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 TEX33O43247 280 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 NFATC1O95644 943 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 ABL1P00519 1130 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CYP17A1P05093 508 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 DRD1P21728 446 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 HOXA6P31267 233 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 OPRD1P41143 372 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 MXI1P50539 228 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 ZNF75DP51815 510 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 NR1I3Q14994 352 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CBWD6Q4V339 395 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CBWD3Q5JTY5 395 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CBWD5Q5RIA9 395 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 SNX30Q5VWJ9 437 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 KRT39Q6A163 491 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CLEC20AQ6ZU45 233 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 GPRIN1Q7Z2K8 1008 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 SEMA4DQ92854 862 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 CYP3A43Q9HB55 503 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 GMIPQ9P107 970 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 NCDNQ9UBB6 729 aa15.96■□□□□ 0.15
RAB40B-203ENST00000570676 SPAG17Q6Q759 2223 aa15.95■□□□□ 0.14
RAB40B-203ENST00000570676 HHLA1C9JL84 531 aa15.95■□□□□ 0.14
RAB40B-203ENST00000570676 SCAMP3O14828 347 aaKnown RBP15.95■□□□□ 0.14
RAB40B-203ENST00000570676 COCHO43405 550 aa15.95■□□□□ 0.14
RAB40B-203ENST00000570676 MBL2P11226 248 aaPredicted RBP15.95■□□□□ 0.14
RAB40B-203ENST00000570676 ADORA2BP29275 332 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms