RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 MYCP01106 439 aaPredicted RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 C6orf222P0C671 652 aaPredicted RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 ATP6V1B1P15313 513 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 GLRBP48167 497 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 FKBP1AP62942 108 aaKnown RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 BMT2Q1RMZ1 405 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 SPDYAQ5MJ70 313 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ELMOD1Q8N336 334 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 ZBTB45Q96K62 511 aaPredicted RBP15.86■□□□□ 0.13
CIITA-204ENST00000570546 HSD3B7Q9H2F3 369 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 EFCAB1Q9HAE3 211 aa15.86■□□□□ 0.13
CIITA-204ENST00000570546 DLG5Q8TDM6 1919 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 C16orf96A6NNT2 1141 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 E9PBE3 544 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 KLHL41O60662 606 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 PYGLP06737 847 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 HNRNPCP07910 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
CIITA-204ENST00000570546 ZSCAN5DPP0CG00 497 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 SPATA31C1P0DKV0 1188 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 ALADP13716 330 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 GCLCP48506 637 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 GTF2BQ00403 316 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 TRMT5Q32P41 509 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 BRSK2Q8IWQ3 736 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 TDRD5Q8NAT2 981 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 CNDP1Q96KN2 507 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 PARK7Q99497 189 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 RUBCNLQ9H714 662 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 BARX2Q9UMQ3 279 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 A0A087WZ62 844 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 FKBP6O75344 327 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 NUDT17P0C025 328 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 RPA3P35244 121 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 MGAT5Q09328 741 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 BST2Q10589 180 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 HYIQ5T013 277 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 FAR2Q96K12 515 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 SRPK1Q96SB4 655 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 FDXACB1Q9BRP7 624 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 KLHL4Q9C0H6 718 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 TSPAN16Q9UKR8 245 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 TBC1D4O60343 1298 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 SNX3O60493 162 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 CBX6O95503 412 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 SLC26A2P50443 739 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 MAMLD1Q13495 774 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 KRT33BQ14525 404 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 AASDHQ4L235 1098 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 DCP1BQ8IZD4 617 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 LMCD1Q9NZU5 365 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 PIK3C2AO00443 1686 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 F8VP50 259 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 RHOBTB1O94844 696 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 N4BP2L1Q5TBK1 243 aaPredicted RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 OLFML2BQ68BL8 750 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 TMPRSS6Q8IU80 811 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 ANKRD13AQ8IZ07 590 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 EFHBQ8N7U6 833 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 UBE2OQ9C0C9 1292 aaKnown RBP15.85■□□□□ 0.13
CIITA-204ENST00000570546 LRRC19Q9H756 370 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 ZNF711Q9Y462 761 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 ROBO3Q96MS0 1386 aa15.85■□□□□ 0.13
CIITA-204ENST00000570546 ACO1P21399 889 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 SLC1A6P48664 564 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 NDST1P52848 882 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 DRG2P55039 364 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 FAAP100Q0VG06 881 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 SLC15A2Q16348 729 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 NBPF12Q5TAG4 269 aaPredicted RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 DENND1BQ6P3S1 775 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 SLC9A9Q8IVB4 645 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 RIC8BQ9NVN3 520 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 GEMIN8Q9NWZ8 242 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 DRD4P21917 467 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 EIF4BP23588 611 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 ZPBP2Q6X784 338 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 EFL1Q7Z2Z2 1120 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 SLC30A1Q9Y6M5 507 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 ADRA1DP25100 572 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 VEPH1Q14D04 833 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 LY6KQ17RY6 165 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 SLITRK1Q96PX8 696 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 NID2Q14112 1375 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 WDR27A2RRH5 827 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 ETS1P14921 441 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 FMO1Q01740 532 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 NFIL3Q16649 462 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 ARSHQ5FYA8 562 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 JADE3Q92613 823 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 PRCCQ92733 491 aaPredicted RBP15.84■□□□□ 0.13
CIITA-204ENST00000570546 APOL2Q9BQE5 337 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 C17orf80Q9BSJ5 609 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 CAAP1Q9H8G2 361 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 COG4Q9H9E3 785 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
CIITA-204ENST00000570546 CYB561D2O14569 222 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 PAEPP09466 180 aa15.83■□□□□ 0.13
CIITA-204ENST00000570546 ODC1P11926 461 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms