RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ANKRD40Q6AI12 368 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RHBDF2Q6PJF5 856 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DHTKD1Q96HY7 919 aaPredicted RBP18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DUSP16Q9BY84 665 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 UBXN6Q9BZV1 441 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CCSER2Q9H7U1 834 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SLC8A2Q9UPR5 921 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 USP3Q9Y6I4 520 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PLXND1Q9Y4D7 1925 aa18.05■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MYO18AQ92614 2054 aaKnown RBP18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PRR5-ARHGAP8B1AHC4 643 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 K7EQS6 105 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TLR5O60602 858 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CHRM1P11229 460 aaPredicted RBP18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SDHBP21912 280 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ADORA2BP29275 332 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 KIF11P52732 1056 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PMS1P54277 932 aaKnown RBP18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ARHGAP8P85298 464 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HSF5Q4G112 596 aaPredicted RBP18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ARHGAP17Q68EM7 881 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GPRIN1Q7Z2K8 1008 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CCDC186Q7Z3E2 898 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RPLP0P6Q8NHW5 317 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 USP33Q8TEY7 942 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GAB3Q8WWW8 586 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SLC35C1Q96A29 364 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RMDN1Q96DB5 314 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 LOXL4Q96JB6 756 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CEP63Q96MT8 703 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CISHQ9NSE2 258 aa18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CIZ1Q9ULV3 898 aaPredicted RBP18.04■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PSMA7O14818 248 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HOXC11O43248 304 aaPredicted RBP18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 FOXD2O60548 495 aaPredicted RBP18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GREM1O60565 184 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CD58P19256 250 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PGFP49763 221 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 LMNB2Q03252 620 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 STIM1Q13586 685 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PUM1Q14671 1186 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■□□ 17
MAP1LC3B-208ENST00000570189 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PPP1R26Q5T8A7 1209 aaPredicted RBP18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HTR3DQ70Z44 454 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PHTF2Q8N3S3 785 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SLC4A11Q8NBS3 891 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TTC16Q8NEE8 873 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 EEF2KMTQ96G04 330 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TMEM176AQ96HP8 235 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MMRN2Q9H8L6 949 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 METTL14Q9HCE5 456 aaKnown RBP18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 CLIC5Q9NZA1 410 aa18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ARMCX3Q9UH62 379 aaPredicted RBP18.03■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ADH5P11766 374 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RAD23BP54727 409 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MRPS21P82921 87 aaKnown RBP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 GAD2Q05329 585 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 DMC1Q14565 340 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 RAB41Q5JT25 222 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 HEATR6Q6AI08 1181 aaKnown RBP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ETFBKMTQ8IXQ9 262 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 ZC3H10Q96K80 434 aaKnown RBP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 PNKPQ96T60 521 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 KLF16Q9BXK1 252 aaPredicted RBP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 SH3BP1Q9Y3L3 701 aa18.02■□□□□ 0.48
MAP1LC3B-208ENST00000570189 TRIM49BA6NDI0 452 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CYP26A1O43174 497 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 APBB3O95704 486 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ACO1P21399 889 aaKnown RBP18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TNFRSF4P43489 277 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PREPLQ4J6C6 727 aaPredicted RBP18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 LY6G5CQ5SRR4 150 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PRR23BQ6ZRT6 265 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TADA2BQ86TJ2 420 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 FAM160A2Q8N612 972 aaPredicted RBP18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 UBR7Q8N806 425 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 KCNV2Q8TDN2 545 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 CDK5RAP1Q96SZ6 601 aaKnown RBP18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 ARID3AQ99856 593 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 PARD6AQ9NPB6 346 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.478e-8■■■■□ 25.6
MAP1LC3B-208ENST00000570189 SPHK2Q9NRA0 654 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 OSER1Q9NX31 292 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MARK1Q9P0L2 795 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MAN1B1Q9UKM7 699 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 MMP17Q9ULZ9 603 aa18.01■□□□□ 0.47
MAP1LC3B-208ENST00000570189 P4HA2O15460 535 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 RPP40O75818 363 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 KAT7O95251 611 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 TBXAS1P24557 533 aaPredicted RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 HOXC13P31276 330 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 GRIA2P42262 883 aa18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 YWHAEP62258 255 aaKnown RBP18■□□□□ 0.47
MAP1LC3B-208ENST00000570189 GOLGA8FQ08AF8 430 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms