RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 THAP4Q8WY91 577 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 LPIN2Q92539 896 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 SDCCAG3Q96C92 435 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 HVCN1Q96D96 273 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 LRRC46Q96FV0 321 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 DYDC2Q96IM9 177 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 HRASLS5Q96KN8 279 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 C7orf26Q96N11 449 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 KCNC2Q96PR1 638 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 PARK7Q99497 189 aaKnown RBP3.57□□□□□ -1.84
CNOT1-221ENST00000569924 DDX23Q9BUQ8 820 aaKnown RBP3.57□□□□□ -1.84
CNOT1-221ENST00000569924 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 OSBPL1AQ9BXW6 950 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 CHST8Q9H2A9 424 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 BICC1Q9H694 974 aaKnown RBP3.57□□□□□ -1.84
CNOT1-221ENST00000569924 RXFP1Q9HBX9 757 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 A1CFQ9NQ94 594 aaKnown RBP3.57□□□□□ -1.84
CNOT1-221ENST00000569924 SALL1Q9NSC2 1324 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 TMEM160Q9NX00 188 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 LMCD1Q9NZU5 365 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 ZDHHC8Q9ULC8 765 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 GPR34Q9UPC5 381 aa3.57□□□□□ -1.84
CNOT1-221ENST00000569924 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.57□□□□□ -1.844e-6■□□□□ 8.7
CNOT1-221ENST00000569924 MYH13Q9UKX3 1938 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MGAMO43451 1857 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ATRNL1Q5VV63 1379 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PDS5AQ29RF7 1337 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CHD8Q9HCK8 2581 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 A0A0G2JLL6 359 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ZC3H12DA2A288 527 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MBD3L4A6NDZ8 208 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MBD3L3A6NE82 208 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PGPEP1LA6NFU8 196 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 HMX3A6NHT5 357 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ANP32CO43423 234 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ASNA1O43681 348 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PRAMEF4O60810 478 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ENTPD3O75355 529 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 FARP2O94887 1054 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 FSBPO95073 299 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MATN4O95460 622 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SGPL1O95470 568 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CYBBP04839 570 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 DBHP09172 617 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TXNP10599 105 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 RARBP10826 455 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MYCLP12524 364 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 IDEP14735 1019 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 KLRC1P26715 233 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 GALNSP34059 522 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 KRT20P35900 424 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SREBF1P36956 1147 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 RFX5P48382 616 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PIK3CGP48736 1102 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CCR5P51681 352 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PNLIPRP1P54315 467 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CASP6P55212 293 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PRKCZQ05513 592 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MAP3K12Q12852 859 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 NFIAQ12857 509 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 LRP8Q14114 963 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 HABP2Q14520 560 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MEA1Q16626 185 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ARHGAP15Q53QZ3 475 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 RALGPS1Q5JS13 557 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 FAM205BPQ63HN1 556 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PAQR3Q6TCH7 311 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TAS1R1Q7RTX1 841 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PRRT2Q7Z6L0 340 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 GATAD2AQ86YP4 633 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CCDC117Q8IWD4 279 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 FAM126BQ8IXS8 530 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SCYL3Q8IZE3 742 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TTC30BQ8N4P2 665 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 BEND7Q8N7W2 519 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ANKRD52Q8NB46 1076 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ADAMTS15Q8TE58 950 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 U2AF1L4Q8WU68 220 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TNPO1Q92973 898 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 UHRF1Q96T88 793 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 PRPF18Q99633 342 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SDF4Q9BRK5 362 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 IDI2Q9BXS1 227 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 AP1M1Q9BXS5 423 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 AGXT2Q9BYV1 514 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 USP44Q9H0E7 712 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 CCDC68Q9H2F9 335 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 MLXIPQ9HAP2 919 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SEPSECSQ9HD40 501 aaKnown RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 SH3GLB2Q9NR46 395 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 LANCL2Q9NS86 450 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 KCND1Q9NSA2 647 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TBC1D23Q9NUY8 699 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 USP40Q9NVE5 1235 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 POLR3BQ9NW08 1133 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-221ENST00000569924 ZNF212Q9UDV6 495 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 TMEM59LQ9UK28 342 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 VAV3Q9UKW4 847 aa3.56□□□□□ -1.84
CNOT1-221ENST00000569924 AK9Q5TCS8 1911 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms