RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 APOBEC3GQ9HC16 384 aaKnown RBP23.82■■□□□ 1.4
RBFOX1-219ENST00000569895 PNPLA8Q9NP80 782 aa23.82■■□□□ 1.4
RBFOX1-219ENST00000569895 HOOK1Q9UJC3 728 aaKnown RBP23.82■■□□□ 1.4
RBFOX1-219ENST00000569895 SCAMP3O14828 347 aaKnown RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 TLR5O60602 858 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 SMC2O95347 1197 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 CD58P19256 250 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 SEC13P55735 322 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 MCCD1P59942 119 aaPredicted RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 GOLGA8FQ08AF8 430 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 GOLGA8DPQ0D2H9 430 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 PNOCQ13519 176 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 GAB4Q2WGN9 574 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 C2orf27AQ580R0 203 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 PRR23CQ6ZRP0 262 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 NUDT18Q6ZVK8 323 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 FMR1NBQ8N0W7 255 aaPredicted RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 TSTD1Q8NFU3 115 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 ZC3H10Q96K80 434 aaKnown RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 POLR3BQ9NW08 1133 aaPredicted RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 SCML2Q9UQR0 700 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 PCDHA5Q9Y5H7 936 aa23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.81■■□□□ 1.4
RBFOX1-219ENST00000569895 CILPO75339 1184 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 KAT7O95251 611 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 ATP5C1P36542 298 aaKnown RBP23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 GRIA2P42262 883 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 HSF5Q4G112 596 aaPredicted RBP23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 ZNF658Q5TYW1 1059 aaPredicted RBP23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 CLEC20AQ6ZU45 233 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 KBTBD6Q86V97 674 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 SMYD4Q8IYR2 804 aaPredicted RBP23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 FBXL13Q8NEE6 735 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 ZFRQ96KR1 1074 aaKnown RBP23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 TWNKQ96RR1 684 aa23.8■■□□□ 1.4
RBFOX1-219ENST00000569895 A0A0A0MRY4 1105 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 RHOBTB1O94844 696 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 ACO1P21399 889 aaKnown RBP23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 TNFRSF4P43489 277 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 SLC6A11P48066 632 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 MXI1P50539 228 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 DGKEP52429 567 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 ELF2Q15723 593 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 LY6G5CQ5SRR4 150 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 C11orf74Q86VG3 221 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 HEXIM2Q96MH2 286 aaKnown RBP23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 ARRDC1-AS1Q9H2J1 176 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 FAM124BQ9H5Z6 455 aaPredicted RBP23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 ARHGEF4Q9NR80 690 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 RAB20Q9NX57 234 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 MMP17Q9ULZ9 603 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 PCDHGA5Q9Y5G8 931 aa23.79■■□□□ 1.4
RBFOX1-219ENST00000569895 HELZP42694 1942 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 ALDH1A2O94788 518 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 PRCPP42785 496 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 FKBP3Q00688 224 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 USP39Q53GS9 565 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 COBLL1Q53SF7 1204 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 TADA2BQ86TJ2 420 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 WHAMMQ8TF30 809 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 JAKMIP2Q96AA8 810 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 EEF2KMTQ96G04 330 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 DUSP16Q9BY84 665 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 CYLDQ9NQC7 956 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 LSM7Q9UK45 103 aaKnown RBP23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 DMXL1Q9Y485 3027 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 DCHS1Q96JQ0 3298 aa23.78■■□□□ 1.4
RBFOX1-219ENST00000569895 EPN2O95208 641 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 IRF1P10914 325 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 PSEN1P49768 467 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 ANO4Q32M45 955 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 HTR3DQ70Z44 454 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 BBS7Q8IWZ6 715 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 CCDC33Q8N5R6 958 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 C12orf50Q8NA57 414 aaPredicted RBP23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 SMARCE1Q969G3 411 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 SPHK2Q9NRA0 654 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 DEC1Q9P2X7 70 aa23.77■■□□□ 1.4
RBFOX1-219ENST00000569895 MED19A0JLT2 244 aaPredicted RBP23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 TBC1D3BA6NDS4 549 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 HHLA1C9JL84 531 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 SLC16A3O15427 465 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 HOXC11O43248 304 aaPredicted RBP23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 ZNF806P0C7X5 589 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 SLC8A3P57103 927 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 CRY1Q16526 586 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 PLK5Q496M5 336 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 ZNF394Q53GI3 561 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 EOGTQ5NDL2 527 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 TCERG1LQ5VWI1 586 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 KLHDC10Q6PID8 442 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 KCNV2Q8TDN2 545 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 SEMA4DQ92854 862 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 TMEM176AQ96HP8 235 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 TIGD1Q96MW7 591 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 CDK5RAP1Q96SZ6 601 aaKnown RBP23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 KLF16Q9BXK1 252 aaPredicted RBP23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 DNMT3LQ9UJW3 386 aa23.76■■□□□ 1.39
RBFOX1-219ENST00000569895 SLC30A4O14863 429 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms