RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 IFNAR2P48551 515 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 PGFP49763 221 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 ZNF132P52740 706 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 PTPN5P54829 565 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 AMPD2Q01433 879 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 TCF15Q12870 199 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 PKDCCQ504Y2 493 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 SMYD5Q6GMV2 418 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 C11orf57Q6ZUT1 292 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 UBA3Q8TBC4 463 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 CLDN23Q96B33 292 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 NACA2Q9H009 215 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 IRF2BPLQ9H1B7 796 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 CYLDQ9NQC7 956 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 SMPD4Q9NXE4 827 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 NDRG2Q9UN36 371 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 A0A1W2PQH9 124 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 TULP2O00295 520 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 SLC9A3R1O14745 358 aaPredicted RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 SETSIPP0DME0 302 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 RARGP13631 454 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 KRT5P13647 590 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 BRD2P25440 801 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 ATP5C1P36542 298 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 RPS9P46781 194 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 PLA2G4AP47712 749 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 TKTL1P51854 596 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 FZD5Q13467 585 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 ARHGAP44Q17R89 818 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 EML3Q32P44 896 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 CDKAL1Q5VV42 579 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 CAVIN1Q6NZI2 390 aaKnown RBP14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 GJB7Q6PEY0 223 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 KCTD13Q8WZ19 329 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 ATP2A3Q93084 1043 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 ZSWIM1Q9BR11 485 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 LINC00597Q9H2U6 94 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 ECT2Q9H8V3 914 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 NMUR1Q9HB89 426 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 LRRC4Q9HBW1 653 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 FANCLQ9NW38 375 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 OSER1Q9NX31 292 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 CLIC5Q9NZA1 410 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 WNT6Q9Y6F9 365 aa14.54□□□□□ -0.08
HERPUD1-218ENST00000569569 MYO18AQ92614 2054 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 E2F8A0AVK6 867 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 OTOL1A6NHN0 477 aaPredicted RBP14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 TPM2P07951 284 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 RALAP11233 206 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 ARSAP15289 507 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 MYL5Q02045 173 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 APBA1Q02410 837 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 TYRO3Q06418 890 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 NR1H3Q13133 447 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 PM20D1Q6GTS8 502 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 KLHDC10Q6PID8 442 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 TXNDC11Q6PKC3 985 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 SCD5Q86SK9 330 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 ZNF687Q8N1G0 1237 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 ARHGAP18Q8N392 663 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 CPA6Q8N4T0 437 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 SLC35F5Q8WV83 523 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 ZFRQ96KR1 1074 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 CDK5RAP1Q96SZ6 601 aaKnown RBP14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 LMAN1LQ9HAT1 526 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 SIX2Q9NPC8 291 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 CFAP97Q9P2B7 532 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 TBC1D14Q9P2M4 693 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 NAGPAQ9UK23 515 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 FANCMQ8IYD8 2048 aa14.53□□□□□ -0.08
HERPUD1-218ENST00000569569 H0Y858 1186 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 M0QYV0 167 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 MED7O43513 233 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 NFATC1O95644 943 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 TBX18O95935 607 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 ZBED1O96006 694 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 CALCAP01258 141 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 CHRNB1P11230 501 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 PTMSP20962 102 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 GJA4P35212 333 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 USP8P40818 1118 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 KCNMA1Q12791 1236 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 PON2Q15165 354 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 C1orf210Q8IVY1 113 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 ADGRG2Q8IZP9 1017 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 SHC3Q92529 594 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 SECISBP2LQ93073 1101 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 EXOC4Q96A65 974 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 HSFY1Q96LI6 401 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 KLF16Q9BXK1 252 aaPredicted RBP14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 ULBP1Q9BZM6 244 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 NAT10Q9H0A0 1025 aaKnown RBP14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 TAB2Q9NYJ8 693 aa14.52□□□□□ -0.09
HERPUD1-218ENST00000569569 DNMT3LQ9UJW3 386 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms