RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LDHAP00338 332 aaKnown RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 NDUFV2P19404 249 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 CASP1P29466 404 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 CYP2J2P51589 502 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 ATXN3P54252 364 aaPredicted RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 MYL6P60660 151 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 NOP14P78316 857 aaKnown RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 PEAR1Q5VY43 1037 aaPredicted RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 TDRD10Q5VZ19 366 aaKnown RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 PAQR9Q6ZVX9 377 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 TRIML1Q8N9V2 468 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 SDCBP2Q9H190 292 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 OLFML3Q9NRN5 406 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 SEL1LQ9UBV2 794 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 SLC6A14Q9UN76 642 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 BEST1O76090 585 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 CAPNS1P04632 268 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 YWHAQP27348 245 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 ABCD1P33897 745 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 STAT6P42226 847 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
USB1-214ENST00000568848 SCAPQ12770 1279 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 CACUL1Q86Y37 369 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 NELFCDQ8IXH7 590 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 TERB1Q8NA31 727 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 MDM1Q8TC05 714 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 PLEKHO2Q8TD55 490 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 JAKMIP2Q96AA8 810 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 CD248Q9HCU0 757 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.78■□□□□ 0.125e-9■■■■■ 51.3
USB1-214ENST00000568848 CACNA2D2Q9NY47 1150 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 NUDT5Q9UKK9 219 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 SH3BP1Q9Y3L3 701 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 R3HCC1Q9Y3T6 440 aaKnown RBP15.78■□□□□ 0.12
USB1-214ENST00000568848 PCDHB13Q9Y5F0 798 aa15.78■□□□□ 0.12
USB1-214ENST00000568848 ACACAQ13085 2346 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 A0A0A0MRY4 1105 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.77■□□□□ 0.12
USB1-214ENST00000568848 ZNF233A6NK53 670 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 A8MXQ7 604 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 OPHN1O60890 802 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 CCDC130P13994 396 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 TNNI1P19237 187 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 TNFRSF4P43489 277 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 PDE6CP51160 858 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 SLC5A3P53794 718 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 GAD2Q05329 585 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 DUOXA1Q1HG43 343 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 COL28A1Q2UY09 1125 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 TPGS1Q6ZTW0 290 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 DPH6Q7L8W6 267 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 BRAPQ7Z569 592 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 NUP93Q8N1F7 819 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 B3GALNT2Q8NCR0 500 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 MED10Q9BTT4 135 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 SPHK2Q9NRA0 654 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 DNAJC17Q9NVM6 304 aaKnown RBP15.77■□□□□ 0.12
USB1-214ENST00000568848 PLK2Q9NYY3 685 aa15.77■□□□□ 0.12
USB1-214ENST00000568848 SRPRBQ9Y5M8 271 aaKnown RBP15.77■□□□□ 0.12
USB1-214ENST00000568848 KNL1Q8NG31 2342 aa15.77■□□□□ 0.11
USB1-214ENST00000568848 NEDD8-MDP1E9PL57 170 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 ARHGAP33O14559 1287 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
USB1-214ENST00000568848 TGFB1I1O43294 461 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 CLSTN1O94985 981 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 BMP15O95972 392 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 SERPINF2P08697 491 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 EIF2DP41214 584 aaKnown RBP15.76■□□□□ 0.11
USB1-214ENST00000568848 KIAA1324Q6UXG2 1013 aaKnown RBP15.76■□□□□ 0.11
USB1-214ENST00000568848 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 RAB44Q7Z6P3 723 aaPredicted RBP15.76■□□□□ 0.11
USB1-214ENST00000568848 PROSER1Q86XN7 944 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 RGL4Q8IZJ4 473 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 ZMIZ2Q8NF64 920 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 CCDC26Q8TAB7 109 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 IPO4Q8TEX9 1081 aaKnown RBP15.76■□□□□ 0.11
USB1-214ENST00000568848 CRELD1Q96HD1 420 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 USP28Q96RU2 1077 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 XYLT2Q9H1B5 865 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 OSER1Q9NX31 292 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 DEC1Q9P2X7 70 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 SLCO1B1Q9Y6L6 691 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 MYH10P35580 1976 aa15.76■□□□□ 0.11
USB1-214ENST00000568848 E2F8A0AVK6 867 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 HOXC11O43248 304 aaPredicted RBP15.75■□□□□ 0.11
USB1-214ENST00000568848 AP5Z1O43299 807 aa15.75■□□□□ 0.11
USB1-214ENST00000568848 GREM1O60565 184 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms