RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 C17orf75Q9HAS0 396 aa10.23□□□□□ -0.77
KARS-209ENST00000568378 ITM2CQ9NQX7 267 aa10.23□□□□□ -0.77
KARS-209ENST00000568378 USP36Q9P275 1121 aaKnown RBP10.23□□□□□ -0.77
KARS-209ENST00000568378 GTF3C4Q9UKN8 822 aa10.23□□□□□ -0.77
KARS-209ENST00000568378 PAXBP1Q9Y5B6 917 aa10.23□□□□□ -0.77
KARS-209ENST00000568378 SPTAN1Q13813 2472 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 TMEM131Q92545 1883 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 KPNA7A9QM74 516 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 WNT7AO00755 349 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 TERTO14746 1132 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 OGTO15294 1046 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 ACADMP11310 421 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 ANXA13P27216 316 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 PSMA5P28066 241 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 MCM7P33993 719 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 GRIK1P39086 918 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 ACADVLP49748 655 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 LIG4P49917 911 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 TPMTP51580 245 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 FUT11Q495W5 492 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 C4orf17Q53FE4 359 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 KIAA1614Q5VZ46 1190 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 FBXL19Q6PCT2 694 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 LAYNQ6UX15 382 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 GATAD2AQ86YP4 633 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 C1orf216Q8TAB5 229 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 OTUB2Q96DC9 234 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 ZNF274Q96GC6 653 aaPredicted RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 ZNF560Q96MR9 790 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 ZNF578Q96N58 590 aaPredicted RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 LARP6Q9BRS8 491 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 CCSER1Q9C0I3 900 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 SPHK2Q9NRA0 654 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 DDX19AQ9NUU7 478 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 DDX43Q9NXZ2 648 aaKnown RBP10.22□□□□□ -0.77
KARS-209ENST00000568378 KCNK4Q9NYG8 393 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 EHD2Q9NZN4 543 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 CLCA2Q9UQC9 943 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 SH3BP1Q9Y3L3 701 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 SNX14Q9Y5W7 946 aa10.22□□□□□ -0.77
KARS-209ENST00000568378 MYLKQ15746 1914 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 SCN1AP35498 2009 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 ZNF840PA6NDX5 716 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 KCNJ18B7U540 433 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 GFRA2O00451 464 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 DFNA5O60443 496 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 ITGAVP06756 1048 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 MAPTP10636 758 aaKnown RBP10.21□□□□□ -0.77
KARS-209ENST00000568378 MYF5P13349 255 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 ABCB4P21439 1286 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 GRIA4P48058 902 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 PPP3CCP48454 512 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 ECM1Q16610 540 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 CFAP221Q4G0U5 840 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 DENND5BQ6ZUT9 1274 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 FAM124AQ86V42 546 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 CACUL1Q86Y37 369 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 PDCL2Q8N4E4 241 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 TMEM161BQ8NDZ6 487 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 PRCCQ92733 491 aaPredicted RBP10.21□□□□□ -0.77
KARS-209ENST00000568378 TNFRSF25Q93038 417 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 SIPA1Q96FS4 1042 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 FUBP3Q96I24 572 aaKnown RBP eCLIP10.21□□□□□ -0.77
KARS-209ENST00000568378 XPO6Q96QU8 1125 aaKnown RBP10.21□□□□□ -0.77
KARS-209ENST00000568378 RUSC1Q9BVN2 902 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 TM9SF3Q9HD45 589 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 DPP3Q9NY33 737 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 SEPT3Q9UH03 358 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 DERAQ9Y315 318 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 SLCO1B1Q9Y6L6 691 aa10.21□□□□□ -0.77
KARS-209ENST00000568378 KNL1Q8NG31 2342 aa10.21□□□□□ -0.78
KARS-209ENST00000568378 WASH3PC4AMC7 463 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 PRRT4C9JH25 899 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 NEDD8-MDP1E9PL57 170 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 HNRNPDLO14979 420 aaKnown RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 PAPSS1O43252 624 aaPredicted RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 SYNCRIPO60506 623 aaKnown RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 HUS1O60921 280 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 OLFM2O95897 454 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 ADRB2P07550 413 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 MAGEA11P43364 429 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 C21orf59P57076 290 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 USP46P62068 366 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 MAPK7Q13164 816 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 ORC1Q13415 861 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 TOB2Q14106 344 aaPredicted RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 CCDC142Q17RM4 750 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 C4orf50Q6ZRC1 276 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 TMEM25Q86YD3 366 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 BBS7Q8IWZ6 715 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 EID2Q8N6I1 236 aa10.2□□□□□ -0.78
KARS-209ENST00000568378 SNRNP27Q8WVK2 155 aaKnown RBP10.2□□□□□ -0.78
KARS-209ENST00000568378 WASF1Q92558 559 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms