RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 E7ENQ6 273 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 FBXO21O94952 628 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 OLFM2O95897 454 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 OAS1P00973 400 aaKnown RBP18.9■□□□□ 0.62
COMMD4-222ENST00000568034 TNFAIP3P21580 790 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 MMP8P22894 467 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 ZP2Q05996 745 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 ASTE1Q2TB18 679 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-222ENST00000568034 C2CD6Q53TS8 623 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 OTOP3Q7RTS5 596 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 MON1AQ86VX9 555 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.9■□□□□ 0.62
COMMD4-222ENST00000568034 SCUBE3Q8IX30 993 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 SPC24Q8NBT2 197 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 IRGQQ8WZA9 623 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 NOX5Q96PH1 765 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 SLC22A12Q96S37 553 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 CHP1Q99653 195 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 MIS12Q9H081 205 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 TLR8Q9NR97 1041 aaKnown RBP18.9■□□□□ 0.62
COMMD4-222ENST00000568034 SEPT11Q9NVA2 429 aaKnown RBP18.9■□□□□ 0.62
COMMD4-222ENST00000568034 GDE1Q9NZC3 331 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 EPS15L1Q9UBC2 864 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 NENFQ9UMX5 172 aa18.9■□□□□ 0.62
COMMD4-222ENST00000568034 NUP210Q8TEM1 1887 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 SOBPA7XYQ1 873 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 LOC730098B7Z3J9 87 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 LAMP2P13473 410 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 FECHP22830 423 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 DDX6P26196 483 aaKnown RBP eCLIP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 GBP2P32456 591 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 MRE11P49959 708 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 TUBP50607 506 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 YWHAGP61981 247 aaKnown RBP eCLIP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 CDK17Q00537 523 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 OLFML1Q6UWY5 402 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 FAM183BPQ6ZVS7 135 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 MON1BQ7L1V2 547 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 ERICH1Q86X53 443 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 PHF13Q86YI8 300 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 ADHFE1Q8IWW8 467 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 TDRD5Q8NAT2 981 aaKnown RBP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 KHSRPQ92945 711 aaKnown RBP eCLIP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 RPGRIP1Q96KN7 1286 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.89■□□□□ 0.61
COMMD4-222ENST00000568034 IMPACTQ9P2X3 320 aa18.89■□□□□ 0.61
COMMD4-222ENST00000568034 TCF20Q9UGU0 1960 aaKnown RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 SSU72P8A0A1W2PR75 194 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 PRAMEF12O95522 483 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 FYNP06241 537 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 FCARP24071 287 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 WEE1P30291 646 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 EIF4A3P38919 411 aaKnown RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 GSE1Q14687 1217 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 TAF5Q15542 800 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ARHGAP15Q53QZ3 475 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 FAM78AQ5JUQ0 283 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ACAD10Q6JQN1 1059 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 MMS22LQ6ZRQ5 1243 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 XYLT1Q86Y38 959 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 DNAAF5Q86Y56 855 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ARL14EPQ8N8R7 260 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 MAB21L3Q8N8X9 362 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ZSCAN18Q8TBC5 510 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ASB16Q96NS5 453 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 C11orf70Q9BRQ4 267 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 RNF38Q9H0F5 515 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 PRKAG3Q9UGI9 489 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 NAGPAQ9UK23 515 aa18.88■□□□□ 0.61
COMMD4-222ENST00000568034 ZFP37Q9Y6Q3 630 aaPredicted RBP18.88■□□□□ 0.61
COMMD4-222ENST00000568034 A0A087X0T9 212 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 C19orf67A6NJJ6 358 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 COCHO43405 550 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 TLR5O60602 858 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ABL1P00519 1130 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 FAM228BP0C875 321 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 RARGP13631 454 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 PFKLP17858 780 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 NSFP46459 744 aaKnown RBP18.87■□□□□ 0.61
COMMD4-222ENST00000568034 PSEN1P49768 467 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 GSCP56915 257 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-222ENST00000568034 HECTD3Q5T447 861 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 BSPRYQ5W0U4 402 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ZDHHC14Q8IZN3 488 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 CMTM8Q8IZV2 173 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ARHGAP18Q8N392 663 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ZNF276Q8N554 614 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ACSF2Q96CM8 615 aaPredicted RBP18.87■□□□□ 0.61
COMMD4-222ENST00000568034 C18orf8Q96DM3 657 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 PANX2Q96RD6 677 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 CYP2S1Q96SQ9 504 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 SLITRK6Q9H5Y7 841 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 TRPC7Q9HCX4 862 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ADAMTS1Q9UHI8 967 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 ZMYM5Q9UJ78 669 aa18.87■□□□□ 0.61
COMMD4-222ENST00000568034 NR2E1Q9Y466 385 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms