RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SLC6A3Q01959 620 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 LMNB2Q03252 620 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 PDE4CQ08493 712 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 CCNG2Q16589 344 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 CCDC137Q6PK04 289 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 GLB1LQ6UWU2 654 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 FAM183BPQ6ZVS7 135 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 LRRC8DQ7L1W4 858 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 METTL23Q86XA0 190 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 MREGQ8N565 214 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 URGCPQ8TCY9 931 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 CASKIN2Q8WXE0 1202 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 LPPQ93052 612 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 ERP44Q9BS26 406 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 FRMD8P1Q9BZ68 369 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
COMMD4-221ENST00000567935 TLR9Q9NR96 1032 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 CDH9Q9ULB4 789 aa15.31■□□□□ 0.04
COMMD4-221ENST00000567935 MED19A0JLT2 244 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-221ENST00000567935 PRR23AA6NEV1 266 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 MEIS3P2A8K0S8 358 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 TTI1O43156 1089 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 MBTPS2O43462 519 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 LRCH4O75427 683 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 SASH3O75995 380 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 GAS8O95995 478 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 PDGFRBP09619 1106 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 CARSP49589 748 aaKnown RBP15.3■□□□□ 0.04
COMMD4-221ENST00000567935 CLCNKBP51801 687 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 KLF1Q13351 362 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-221ENST00000567935 WSCD1Q658N2 575 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 AADACL2Q6P093 401 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 DCLRE1AQ6PJP8 1040 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 OLFML1Q6UWY5 402 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 SLC26A9Q7LBE3 791 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 OSTM1Q86WC4 334 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 JAMLQ86YT9 394 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 KCTD13Q8WZ19 329 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 APBB2Q92870 758 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 SLITRK1Q96PX8 696 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 DUSP16Q9BY84 665 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 DPEP3Q9H4B8 488 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 MIOSQ9NXC5 875 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 NR2E1Q9Y466 385 aa15.3■□□□□ 0.04
COMMD4-221ENST00000567935 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 ECEL1O95672 775 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 MYBL2P10244 700 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 RALAP11233 206 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 NPR3P17342 541 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 TYMPP19971 482 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 LMO2P25791 158 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 PTGIRP43119 386 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 SLC25A11Q02978 314 aaKnown RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 HLTFQ14527 1009 aaKnown RBP eCLIP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 MAPRE1Q15691 268 aaKnown RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 TFDP3Q5H9I0 405 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 EFHC1Q5JVL4 640 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 ZFYVE27Q5T4F4 411 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 DUPD1Q68J44 220 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 DRICH1Q6PGQ1 229 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 SPOCD1Q6ZMY3 1216 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 ADAT2Q7Z6V5 191 aaKnown RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 VSIG1Q86XK7 387 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 CCDC105Q8IYK2 499 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 SLC2A14Q8TDB8 520 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 LRRC45Q96CN5 670 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 TBCBQ99426 244 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 SYT15Q9BQS2 421 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 UBXN6Q9BZV1 441 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 MED4Q9NPJ6 270 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 DDX43Q9NXZ2 648 aaKnown RBP15.29■□□□□ 0.04
COMMD4-221ENST00000567935 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 ZFHX4Q86UP3 3567 aa15.29■□□□□ 0.04
COMMD4-221ENST00000567935 M0QZQ0 153 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 NDC80O14777 642 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 FAM200BP0CF97 657 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 CCDC130P13994 396 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 ADORA2BP29275 332 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 AVPR2P30518 371 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 SDC4P31431 198 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 PTPN9P43378 593 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 RGS7P49802 495 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 ZXDAP98168 799 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 TAZQ16635 292 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 BOLA3Q53S33 107 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 SPDYCQ5MJ68 293 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 CNKSR3Q6P9H4 555 aa15.28■□□□□ 0.04
COMMD4-221ENST00000567935 ZDHHC14Q8IZN3 488 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms