RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NOGQ13253 232 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ZKSCAN8Q15776 578 aaPredicted RBP18.5■□□□□ 0.55
CMTM3-214ENST00000567572 PDIK1LQ8N165 341 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 KCTD6Q8NC69 237 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 CNPY3Q9BT09 278 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ELOVL4Q9GZR5 314 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 YY1AP1Q9H869 796 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 MLXIPLQ9NP71 852 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 GTF2IRD1Q9UHL9 959 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 TRIP11Q15643 1979 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 RECQL4O94761 1208 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 MICAL2O94851 1124 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 TRUB2O95900 331 aaKnown RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 PGK1P00558 417 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 FOXN2P32314 431 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 GBP2P32456 591 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 GPX6P59796 221 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 CAP1Q01518 475 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 TRIM32Q13049 653 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 PKN2Q16513 984 aaKnown RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 UBXN11Q5T124 520 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 ADGRD1Q6QNK2 874 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 ZNF398Q8TD17 642 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 ACSF2Q96CM8 615 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 TRIM6Q9C030 488 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 TXLNGQ9NUQ3 528 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 RABGEF1Q9UJ41 708 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 USP18Q9UMW8 372 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 USH1CQ9Y6N9 552 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 CENPFP49454 3210 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 CLUHO75153 1309 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 TM9SF1O15321 606 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 ALADP13716 330 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 MIPP30301 263 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 RPL22P35268 128 aaKnown RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 GPD2P43304 727 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 SETDB1Q15047 1291 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 RFX6Q8HWS3 928 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 LRRC8CQ8TDW0 803 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 ARHGEF3Q9NR81 526 aa18.49■□□□□ 0.55
CMTM3-214ENST00000567572 BARX2Q9UMQ3 279 aaPredicted RBP18.49■□□□□ 0.55
CMTM3-214ENST00000567572 CFAP69A5D8W1 941 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 VGLL3A8MV65 326 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 M0QYV0 167 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 EDF1O60869 148 aaKnown RBP18.48■□□□□ 0.55
CMTM3-214ENST00000567572 DCTN3O75935 186 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 CA4P22748 312 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 ALDH3A1P30838 453 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 EIF3EP60228 445 aaKnown RBP18.48■□□□□ 0.55
CMTM3-214ENST00000567572 CACNB2Q08289 660 aaPredicted RBP18.48■□□□□ 0.55
CMTM3-214ENST00000567572 NOMO1Q15155 1222 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 SMTNL2Q2TAL5 461 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 NBPF20Q3BBV1 942 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 ASRGL1Q7L266 308 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 FITM2Q8N6M3 262 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 KLHL29Q96CT2 875 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 SPC25Q9HBM1 224 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 TUBGCP4Q9UGJ1 667 aa18.48■□□□□ 0.55
CMTM3-214ENST00000567572 FOXO6A8MYZ6 492 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 ZNF487B1APH4 448 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 DPYSL4O14531 572 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 ADAMTS4O75173 837 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 RARBP10826 455 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 EZRP15311 586 aaKnown RBP18.47■□□□□ 0.55
CMTM3-214ENST00000567572 GPD1P21695 349 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 GDF10P55107 478 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 DYNLT1P63172 113 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 ROR1Q01973 937 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 ORC1Q13415 861 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 XKR4Q5GH76 650 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 LCLAT1Q6UWP7 414 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 MAP7D3Q8IWC1 876 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 LRRC52Q8N7C0 313 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 BEST2Q8NFU1 509 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 NOD2Q9HC29 1040 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 CD248Q9HCU0 757 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 PHTF1Q9UMS5 762 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 PPEF2O14830 753 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 AOC2O75106 756 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 UNC5CO95185 931 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 SETSIPP0DME0 302 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 DESP17661 470 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 MRPS6P82932 125 aaKnown RBP18.47■□□□□ 0.55
CMTM3-214ENST00000567572 PDK2Q15119 407 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 KCNT1Q5JUK3 1230 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-214ENST00000567572 HHATQ5VTY9 493 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 C4orf22Q6V702 233 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 FAM228AQ86W67 206 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 TEKT4Q8WW24 435 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 C18orf25Q96B23 403 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-214ENST00000567572 CYTH2Q99418 400 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 TBCBQ99426 244 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 PAFAH2Q99487 392 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 TJP2Q9UDY2 1190 aa18.47■□□□□ 0.55
CMTM3-214ENST00000567572 C2CD4BA6NLJ0 364 aa18.46■□□□□ 0.55
CMTM3-214ENST00000567572 CHADO15335 359 aa18.46■□□□□ 0.55
CMTM3-214ENST00000567572 SPAG7O75391 227 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms