RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MTA2O94776 668 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 CBX6O95503 412 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 ERBB2P04626 1255 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 BCAT1P54687 386 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 TSPY1Q01534 308 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 PDK1Q15118 436 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 TAF5Q15542 800 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 PLEKHH3Q7Z736 793 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 ADGRF2Q8IZF7 708 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 THEM5Q8N1Q8 247 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 AGGF1Q8N302 714 aaeCLIP12.02□□□□□ -0.49
CDH1-210ENST00000566612 HDAC11Q96DB2 347 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 TRIM33Q9UPN9 1127 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 NEMP1O14524 444 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 MYL2P10916 166 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 YY1P25490 414 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 HUNKP57058 714 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 CRADDP78560 199 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 ADIGQ0VDE8 80 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 EFTUD2Q15029 972 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDH1-210ENST00000566612 KCNT2Q6UVM3 1135 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 ZNF75CPQ92670 426 aaPredicted RBP12.02□□□□□ -0.49
CDH1-210ENST00000566612 PRCCQ92733 491 aaPredicted RBP12.02□□□□□ -0.49
CDH1-210ENST00000566612 THTPAQ9BU02 230 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 STOML1Q9UBI4 398 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 RGS20O76081 388 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 NRLP54845 237 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 KCNJ2P63252 427 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 CDC42EP1Q00587 391 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 EDEM1Q92611 657 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 VCX3BQ9H321 246 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 CPSF3Q9UKF6 684 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 DRG1Q9Y295 367 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 MAP3K7O43318 606 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 CCDC22O60826 627 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 USP12O75317 370 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 LUC7L3O95232 432 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 SKIP12755 728 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 GRIK1P39086 918 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 SLC6A3Q01959 620 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 SLC27A1Q6PCB7 646 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 BBS12Q6ZW61 710 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 A0A1B0GUL6 1792 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 PLCH1Q4KWH8 1693 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 ARIH2O95376 493 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 POLBP06746 335 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 ZNF157P51786 506 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 LRRC36Q1X8D7 754 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 DEFB106AQ8N104 65 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 CYP4X1Q8N118 509 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 XAB2Q9HCS7 855 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 C20orf96Q9NUD7 363 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 GTSE1Q9NYZ3 720 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 SRCAPQ6ZRS2 3230 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 DNM1LO00429 736 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 ZNF143P52747 638 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 BEX3Q00994 111 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 BST2Q10589 180 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 PCSK7Q16549 785 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 FASTKD1Q53R41 847 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 PPP1R26Q5T8A7 1209 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 ITPRIPL1Q6GPH6 555 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 YTHDF3Q7Z739 585 aaKnown RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 GLIS1Q8NBF1 620 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 COLGALT1Q8NBJ5 622 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH1-210ENST00000566612 CCDC97Q96F63 343 aaPredicted RBP12.01□□□□□ -0.49
CDH1-210ENST00000566612 ELOVL4Q9GZR5 314 aa12.01□□□□□ -0.49
CDH1-210ENST00000566612 H0YGN5 161 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ANP32DO95626 131 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ITGAVP06756 1048 aa12□□□□□ -0.49
CDH1-210ENST00000566612 HMBSP08397 361 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ART3Q13508 389 aa12□□□□□ -0.49
CDH1-210ENST00000566612 GRAMD1BQ3KR37 738 aa12□□□□□ -0.49
CDH1-210ENST00000566612 TAS1R3Q7RTX0 852 aa12□□□□□ -0.49
CDH1-210ENST00000566612 SNRNP25Q9BV90 132 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 MTO1Q9Y2Z2 717 aaKnown RBP12□□□□□ -0.49
CDH1-210ENST00000566612 NFS1Q9Y697 457 aa12□□□□□ -0.49
CDH1-210ENST00000566612 KPNA7A9QM74 516 aa12□□□□□ -0.49
CDH1-210ENST00000566612 MSCO60682 206 aa12□□□□□ -0.49
CDH1-210ENST00000566612 ICAM3P32942 547 aa12□□□□□ -0.49
CDH1-210ENST00000566612 CDKN2BP42772 138 aa12□□□□□ -0.49
CDH1-210ENST00000566612 TKTL1P51854 596 aa12□□□□□ -0.49
CDH1-210ENST00000566612 GTF2A2P52657 109 aa12□□□□□ -0.49
CDH1-210ENST00000566612 RASIP1Q5U651 963 aa12□□□□□ -0.49
CDH1-210ENST00000566612 CCDC117Q8IWD4 279 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms