RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 ZNF865P0CJ78 1059 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-205ENST00000566136 SCG2P13521 617 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 C12orf60Q5U649 245 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 ESRP1Q6NXG1 681 aaKnown RBP11.25□□□□□ -0.61
UBFD1-205ENST00000566136 H1FNTQ75WM6 255 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-205ENST00000566136 PXKQ7Z7A4 578 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 CCDC103Q8IW40 242 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 LRRC43Q8N309 656 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 RBM14Q96PK6 669 aaKnown RBP11.25□□□□□ -0.61
UBFD1-205ENST00000566136 KAT14Q9H8E8 782 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 ZNF304Q9HCX3 659 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 OGDHLQ9ULD0 1010 aa11.25□□□□□ -0.61
UBFD1-205ENST00000566136 SYNJ2BP-COX16A0A087WUM0 186 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 UBXN8O00124 270 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 ARVCFO00192 962 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 MSH2P43246 934 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 FAM189BP81408 668 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 RBP5P82980 135 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 SNX17Q15036 470 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 CST9Q5W186 159 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 SUSD1Q6UWL2 747 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 CCDC150Q8NCX0 1101 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 DENND1AQ8TEH3 1009 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 STAMQ92783 540 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 WDR89Q96FK6 387 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-205ENST00000566136 GLIS2Q9BZE0 524 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-205ENST00000566136 PPFIA2O75334 1257 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 USP1O94782 785 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 MCM7P33993 719 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 KCNC1P48547 511 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 PLCD1P51178 756 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 ALDH3A2P51648 485 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 NSUN2Q08J23 767 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBFD1-205ENST00000566136 LINC00346Q8IVM7 164 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 EFHBQ8N7U6 833 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 SCAMP5Q8TAC9 235 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 VPS39Q96JC1 886 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 ZDHHC15Q96MV8 337 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 EDEM3Q9BZQ6 932 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
UBFD1-205ENST00000566136 NDC80O14777 642 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 RARAP10276 462 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 RARGP13631 454 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 EEF2P13639 858 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 ARNTP27540 789 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 AUHQ13825 339 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 PFKFB3Q16875 520 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 E4F1Q66K89 784 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 AGBL5Q8NDL9 886 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 MED15Q96RN5 788 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 CPA4Q9UI42 421 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 F5H0A9 414 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 H7C1D1 291 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 KIAA0355O15063 1070 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 HTRA2O43464 458 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 S1PR4O95977 384 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 EGFRP00533 1210 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 EIF2DP41214 584 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 SMYD4Q8IYR2 804 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 GALNT4Q8N4A0 578 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 ARRDC4Q8NCT1 418 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 CALML4Q96GE6 196 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 NOL10Q9BSC4 688 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 TTPALQ9BTX7 342 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 BHLHE41Q9C0J9 482 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 MKRN2Q9H000 416 aaKnown RBP11.23□□□□□ -0.61
UBFD1-205ENST00000566136 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 JRKLQ9Y4A0 524 aa11.23□□□□□ -0.61
UBFD1-205ENST00000566136 FAM205AQ6ZU69 1335 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 ZBTB14O43829 449 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 RTN2O75298 545 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 BCAS2O75934 225 aaPredicted RBP11.22□□□□□ -0.61
UBFD1-205ENST00000566136 THP07101 528 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CD247P20963 164 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 BTDP43251 543 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 STX17P56962 302 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 OCRLQ01968 901 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 POU4F3Q15319 338 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CPZQ66K79 652 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 DLK2Q6UY11 383 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 KRT74Q7RTS7 529 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CPLX4Q7Z7G2 160 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 VSTM4Q8IW00 320 aa11.22□□□□□ -0.61
UBFD1-205ENST00000566136 CCDC112Q8NEF3 446 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms