RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KDSRQ06136 332 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 BECN1Q14457 450 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 TRIP6Q15654 476 aaKnown RBP13.57□□□□□ -0.24
RNF40-208ENST00000565995 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 SYCP3Q8IZU3 236 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 NUP93Q8N1F7 819 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 TERB1Q8NA31 727 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 PCIF1Q9H4Z3 704 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 SPHK2Q9NRA0 654 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 SMPD4Q9NXE4 827 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 KIAA1522Q9P206 1035 aaPredicted RBP13.57□□□□□ -0.24
RNF40-208ENST00000565995 DEC1Q9P2X7 70 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
RNF40-208ENST00000565995 TBC1D3BA6NDS4 549 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 COCHO43405 550 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 RTN3O95197 1032 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 CST3P01034 146 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 TNNC2P02585 160 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 PTPN1P18031 435 aaKnown RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 YWHAQP27348 245 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 SCAPQ12770 1279 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 SOWAHCQ53LP3 525 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 MDH1BQ5I0G3 518 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 CCNI2Q6ZMN8 369 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 GABRG3Q99928 467 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 MRPL45Q9BRJ2 306 aaKnown RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 GTPBP2Q9BX10 602 aaKnown RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 FAM124BQ9H5Z6 455 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 FSCN3Q9NQT6 498 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 COMMD8Q9NX08 183 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 TBC1D7Q9P0N9 293 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 CALCOCO1Q9P1Z2 691 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 CIZ1Q9ULV3 898 aaPredicted RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
RNF40-208ENST00000565995 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
RNF40-208ENST00000565995 NUMA1Q14980 2115 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 CBFA2T3O75081 653 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 ABL1P00519 1130 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 HOXB2P14652 356 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 HECTD3Q5T447 861 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 BTBD8Q5XKL5 378 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 HTR3DQ70Z44 454 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 TRAPPC11Q7Z392 1133 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 METTL3Q86U44 580 aaKnown RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 MIB1Q86YT6 1006 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 NAT16Q8N8M0 369 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 B3GNT5Q9BYG0 378 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 ZDHHC5Q9C0B5 715 aa13.55□□□□□ -0.24
RNF40-208ENST00000565995 FBXO2Q9UK22 296 aaPredicted RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
RNF40-208ENST00000565995 GFRA2O00451 464 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
RNF40-208ENST00000565995 SH3BP5O60239 455 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 CACNG3O60359 315 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 GREM1O60565 184 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
RNF40-208ENST00000565995 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
RNF40-208ENST00000565995 ZNF883P0CG24 379 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 NDUFV2P19404 249 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 C10orf76Q5T2E6 689 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 LARP1BQ659C4 914 aaKnown RBP13.54□□□□□ -0.24
RNF40-208ENST00000565995 DBX2Q6ZNG2 339 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 HS2ST1Q7LGA3 356 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 BBS7Q8IWZ6 715 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 DEFB119Q8N690 84 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 TRIML1Q8N9V2 468 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 DNASE2BQ8WZ79 361 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 CAMK1GQ96NX5 476 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 ZNF518BQ9C0D4 1074 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 SNX25Q9H3E2 840 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 PANK4Q9NVE7 773 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 DKK4Q9UBT3 224 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 SUSD2Q9UGT4 822 aa13.54□□□□□ -0.24
RNF40-208ENST00000565995 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
RNF40-208ENST00000565995 KALRNO60229 2985 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
RNF40-208ENST00000565995 DKK1O94907 266 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 FTH1P19P0C7X4 201 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 HOXD13P35453 343 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 SYCP2LQ5T4T6 812 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 EGFLAMQ63HQ2 1017 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 SDE2Q6IQ49 451 aa13.53□□□□□ -0.24
RNF40-208ENST00000565995 PAQR9Q6ZVX9 377 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms