RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TLR8Q9NR97 1041 aaKnown RBP21.01■□□□□ 0.95
CLN6-206ENST00000565471 EBF1Q9UH73 591 aa21.01■□□□□ 0.95
CLN6-206ENST00000565471 SH3BP1Q9Y3L3 701 aa21.01■□□□□ 0.95
CLN6-206ENST00000565471 CEP250Q9BV73 2442 aa21.01■□□□□ 0.95
CLN6-206ENST00000565471 HHLA1C9JL84 531 aa21■□□□□ 0.95
CLN6-206ENST00000565471 K7EQS6 105 aa21■□□□□ 0.95
CLN6-206ENST00000565471 SCAMP3O14828 347 aaKnown RBP21■□□□□ 0.95
CLN6-206ENST00000565471 SMC2O95347 1197 aa21■□□□□ 0.95
CLN6-206ENST00000565471 APBB3O95704 486 aa21■□□□□ 0.95
CLN6-206ENST00000565471 CD58P19256 250 aa21■□□□□ 0.95
CLN6-206ENST00000565471 CSRP2Q16527 193 aa21■□□□□ 0.95
CLN6-206ENST00000565471 CACNA2D4Q7Z3S7 1137 aa21■□□□□ 0.95
CLN6-206ENST00000565471 ZC3H3Q8IXZ2 948 aaKnown RBP21■□□□□ 0.95
CLN6-206ENST00000565471 SEMA4DQ92854 862 aa21■□□□□ 0.95
CLN6-206ENST00000565471 LOXL4Q96JB6 756 aa21■□□□□ 0.95
CLN6-206ENST00000565471 HHIPQ96QV1 700 aa21■□□□□ 0.95
CLN6-206ENST00000565471 PNKPQ96T60 521 aa21■□□□□ 0.95
CLN6-206ENST00000565471 TSG101Q99816 390 aa21■□□□□ 0.95
CLN6-206ENST00000565471 NACA2Q9H009 215 aa21■□□□□ 0.95
CLN6-206ENST00000565471 FAM124BQ9H5Z6 455 aaPredicted RBP21■□□□□ 0.95
CLN6-206ENST00000565471 CYLDQ9NQC7 956 aa21■□□□□ 0.95
CLN6-206ENST00000565471 SEMA4GQ9NTN9 838 aa21■□□□□ 0.95
CLN6-206ENST00000565471 POLR3BQ9NW08 1133 aaPredicted RBP21■□□□□ 0.95
CLN6-206ENST00000565471 SCML2Q9UQR0 700 aa21■□□□□ 0.95
CLN6-206ENST00000565471 PCDHA5Q9Y5H7 936 aa21■□□□□ 0.95
CLN6-206ENST00000565471 AXIN1O15169 862 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 SLC16A3O15427 465 aaKnown RBP20.99■□□□□ 0.95
CLN6-206ENST00000565471 FOXD2O60548 495 aaPredicted RBP20.99■□□□□ 0.95
CLN6-206ENST00000565471 TLR5O60602 858 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 ADH5P11766 374 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 GPRIN1Q7Z2K8 1008 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 EEF2KMTQ96G04 330 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 RAB20Q9NX57 234 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 HOOK1Q9UJC3 728 aaKnown RBP20.99■□□□□ 0.95
CLN6-206ENST00000565471 CACNA1AO00555 2505 aa20.99■□□□□ 0.95
CLN6-206ENST00000565471 EML5Q05BV3 1969 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 A0A0A0MRY4 1105 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.98■□□□□ 0.95
CLN6-206ENST00000565471 CCDC192P0DO97 292 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 PGFP49763 221 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 MRPS21P82921 87 aaKnown RBP20.98■□□□□ 0.95
CLN6-206ENST00000565471 FKBP3Q00688 224 aaKnown RBP20.98■□□□□ 0.95
CLN6-206ENST00000565471 GAD2Q05329 585 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 LRRC63Q05C16 580 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 LY6G5CQ5SRR4 150 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 SMARCE1Q969G3 411 aa20.98■□□□□ 0.95
CLN6-206ENST00000565471 ZC3H10Q96K80 434 aaKnown RBP20.98■□□□□ 0.95
CLN6-206ENST00000565471 CDV3Q9UKY7 258 aaKnown RBP20.98■□□□□ 0.95
CLN6-206ENST00000565471 CYP26A1O43174 497 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 HOXC11O43248 304 aaPredicted RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 KAT7O95251 611 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 APODP05090 189 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 ACO1P21399 889 aaKnown RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 SLC6A11P48066 632 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 KIF11P52732 1056 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 HSF5Q4G112 596 aaPredicted RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 KLHDC10Q6PID8 442 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 PRR23CQ6ZRP0 262 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 KBTBD6Q86V97 674 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 C12orf40Q86WS4 652 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 BBS7Q8IWZ6 715 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 ELOA2Q8IYF1 753 aaPredicted RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 TSTD1Q8NFU3 115 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 KLF16Q9BXK1 252 aaPredicted RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 DUSP16Q9BY84 665 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 MMP17Q9ULZ9 603 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 COQ4Q9Y3A0 265 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.97■□□□□ 0.95
CLN6-206ENST00000565471 SPAG17Q6Q759 2223 aa20.97■□□□□ 0.95
CLN6-206ENST00000565471 EPN2O95208 641 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 ATP5C1P36542 298 aaKnown RBP20.96■□□□□ 0.95
CLN6-206ENST00000565471 GRIA2P42262 883 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 PSEN1P49768 467 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 ATXN1P54253 815 aaKnown RBP20.96■□□□□ 0.95
CLN6-206ENST00000565471 SEC13P55735 322 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 GOLGA8FQ08AF8 430 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 GOLGA8DPQ0D2H9 430 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 C2orf27AQ580R0 203 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 PPP1R26Q5T8A7 1209 aaPredicted RBP20.96■□□□□ 0.95
CLN6-206ENST00000565471 ANKRD40Q6AI12 368 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 HTR3DQ70Z44 454 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 CCDC186Q7Z3E2 898 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 ETFBKMTQ8IXQ9 262 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 ZNF276Q8N554 614 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 NETO1Q8TDF5 533 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 JAKMIP2Q96AA8 810 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 RTKNQ9BST9 563 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 ARHGEF4Q9NR80 690 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 SPHK2Q9NRA0 654 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 CISHQ9NSE2 258 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 OSER1Q9NX31 292 aa20.96■□□□□ 0.95
CLN6-206ENST00000565471 RALGAPA1Q6GYQ0 2036 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 MYOFQ9NZM1 2061 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 GREM1O60565 184 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 CHRM1P11229 460 aaPredicted RBP20.95■□□□□ 0.94
CLN6-206ENST00000565471 TNFRSF4P43489 277 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 PMS1P54277 932 aaKnown RBP20.95■□□□□ 0.94
CLN6-206ENST00000565471 MESP2Q0VG99 397 aa20.95■□□□□ 0.94
CLN6-206ENST00000565471 PREPLQ4J6C6 727 aaPredicted RBP20.95■□□□□ 0.94
CLN6-206ENST00000565471 CBWD6Q4V339 395 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms