RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PDHBP11177 359 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 MARCKSP29966 332 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 IL15P40933 162 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 SERPINB8P50452 374 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 FXR1P51114 621 aaKnown RBP eCLIP5.95□□□□□ -1.46
CHD9-210ENST00000564582 STAT5BP51692 787 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 INHBEP58166 350 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 CCT2P78371 535 aaKnown RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 IRX4P78413 519 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 NFKB2Q00653 900 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ACVR2BQ13705 512 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ITGA9Q13797 1035 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 MTF1Q14872 753 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 TBC1D25Q3MII6 688 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ANKRD20A2Q5SQ80 823 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ANKRD20A1Q5TYW2 823 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ANKRD20A3Q5VUR7 823 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 HAUS3Q68CZ6 603 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 FAM228AQ86W67 206 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 RASSF3Q86WH2 238 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.95□□□□□ -1.46
CHD9-210ENST00000564582 NME8Q8N427 588 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 AFAP1L2Q8N4X5 818 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ACTRT1Q8TDG2 376 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 MAIP1Q8WWC4 291 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 RIN2Q8WYP3 895 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 ZBTB10Q96DT7 871 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 DYDC2Q96IM9 177 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 HIST1H2AHQ96KK5 128 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 PLEKHG4BQ96PX9 1271 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 LMF1Q96S06 567 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 HIST1H2AJQ99878 128 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 CENPKQ9BS16 269 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 SPZ1Q9BXG8 430 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 KIAA1683Q9H0B3 1180 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 WNT8AQ9H1J5 351 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 MTG2Q9H4K7 406 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 MSL2Q9HCI7 577 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ARHGEF3Q9NR81 526 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 POLR3BQ9NW08 1133 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 PAG1Q9NWQ8 432 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 AIPL1Q9NZN9 384 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 STK26Q9P289 416 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 RASAL2Q9UJF2 1139 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 FBXO2Q9UK22 296 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 DENND2AQ9ULE3 1009 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 PAIP2BQ9ULR5 123 aaKnown RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 PTPN22Q9Y2R2 807 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 ARL2BPQ9Y2Y0 163 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 UTP11Q9Y3A2 253 aaKnown RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 USP15Q9Y4E8 981 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 CTDP1Q9Y5B0 961 aaPredicted RBP5.95□□□□□ -1.46
CHD9-210ENST00000564582 FPGT-TNNI3KV9GXZ4 949 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 LMTK3Q96Q04 1460 aa5.95□□□□□ -1.46
CHD9-210ENST00000564582 FAM208AQ9UK61 1670 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 TTC26A0AVF1 554 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 CCDC162PA2VCL2 907 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 TEX33O43247 280 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 ZBTB43O43298 467 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 STRNO43815 780 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 AKR1B10O60218 316 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 KDM1AO60341 852 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 CTNND1O60716 968 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 DIAPH2O60879 1101 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 DCTN3O75935 186 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 GFPT2O94808 682 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 EYA4O95677 639 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MMP1P03956 469 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 ITGB3P05106 788 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 PCP11498 1178 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 CCNB1P14635 433 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 DRD4P21917 467 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 LONP1P36776 959 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 MSH2P43246 934 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MAGEA1P43355 309 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 MMP13P45452 471 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 NPEPPSP55786 919 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 EIF4A1P60842 406 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 FAPQ12884 760 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 BNIP1Q12981 228 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 IDI1Q13907 227 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 NFYCQ13952 458 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 SPIDRQ14159 915 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 ALX1Q15699 326 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 RRAGBQ5VZM2 374 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 KLC3Q6P597 504 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 FAM43BQ6ZT52 329 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 LARP4Q71RC2 724 aaKnown RBP eCLIP5.94□□□□□ -1.46
CHD9-210ENST00000564582 CCDC80Q76M96 950 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 STRA8Q7Z7C7 330 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 PHLDB2Q86SQ0 1253 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 ZNF589Q86UQ0 364 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 CIR1Q86X95 450 aaPredicted RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 ENDOVQ8N8Q3 282 aaKnown RBP5.94□□□□□ -1.46
CHD9-210ENST00000564582 ATL2Q8NHH9 583 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 RSPH1Q8WYR4 309 aa5.94□□□□□ -1.46
CHD9-210ENST00000564582 RAPGEF5Q92565 580 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms