RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TBC1D22BQ9NU19 505 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 USP22Q9UPT9 525 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 SAC3D1A6NKF1 404 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 GOLGA6L6A8MZA4 724 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 PPP6R2O75170 966 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 LARGE1O95461 756 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TBX18O95935 607 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RXRAP19793 462 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RBL1P28749 1068 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ADORA2AP29274 412 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 CD6P30203 668 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 KRT9P35527 623 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 PRKAG1P54619 331 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RPS7P62081 194 aaKnown RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 SLC12A1Q13621 1099 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 SLC9C2Q5TAH2 1124 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 FOXR2Q6PJQ5 311 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 MICALCLQ6ZW33 695 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 LRRC71Q8N4P6 559 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TMEM57Q8N5G2 664 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 C3orf49Q96BT1 292 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 KTI12Q96EK9 354 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 BOD1Q96IK1 185 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 ZBTB45Q96K62 511 aaPredicted RBP2.94□□□□□ -1.94
CHD9-209ENST00000564255 NEUROD6Q96NK8 337 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 TEX101Q9BY14 249 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 CHODLQ9H9P2 273 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 GOLGA2P5Q9HBQ8 144 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 RNF181Q9P0P0 153 aa2.94□□□□□ -1.94
CHD9-209ENST00000564255 LOC105369274A0A096LPK9 316 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 LOC102723532A0A0G2JNH3 316 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 MYADML2A6NDP7 307 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 NPEPPSL1A6NEC2 478 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 CAPN14A8MX76 684 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TOR1BO14657 336 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 CYP27B1O15528 508 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 GPR42O15529 346 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TRIAP1O43715 76 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 NUAK1O60285 661 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 RPS6KA4O75676 772 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TMEM63AO94886 807 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 WDR47O94967 919 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 PLATP00750 562 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 HSP90AA1P07900 732 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 PRKAR1BP31321 381 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 AKT1P31749 480 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 SCNN1GP51170 649 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD9-209ENST00000564255 ANKRD1Q15327 319 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 RBM20Q5T481 1227 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 SP5Q6BEB4 398 aaPredicted RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 Q6ZRM9 215 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TTC30AQ86WT1 665 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 MAPKAPK5Q8IW41 473 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 OR4N4Q8N0Y3 316 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 CEP70Q8NHQ1 597 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TMEM171Q8WVE6 324 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 HAPLN3Q96S86 360 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 GPR87Q9BY21 358 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 SMC4Q9NTJ3 1288 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TMLHEQ9NVH6 421 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 DKK2Q9UBU2 259 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 ZBTB1Q9Y2K1 713 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 SLC27A6Q9Y2P4 619 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 AHRRA9YTQ3 701 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 ZSCAN9O15535 394 aaPredicted RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 CTIFO43310 598 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 TIMM44O43615 452 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TSPAN3O60637 253 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 ERN1O75460 977 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 ZSCAN22P10073 491 aaPredicted RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 SERPINA4P29622 427 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 GATMP50440 423 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 ATXN1P54253 815 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 CSHL1Q14406 222 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 NFIXQ14938 502 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 TBRG1Q3YBR2 411 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 GPATCH4Q5T3I0 446 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 C16orf54Q6UWD8 224 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 C4orf50Q6ZRC1 276 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 GSPT2Q8IYD1 628 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 ADAMTS18Q8TE60 1221 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 ATG4AQ8WYN0 398 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 CPT1BQ92523 772 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 FAM136AQ96C01 138 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 RRP36Q96EU6 259 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 VN1R3Q9BXE9 311 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 UNKLQ9H9P5 680 aaKnown RBP2.93□□□□□ -1.94
CHD9-209ENST00000564255 SORCS3Q9UPU3 1222 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 AFG3L2Q9Y4W6 797 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 SNX14Q9Y5W7 946 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 FPGT-TNNI3KV9GXZ4 949 aa2.93□□□□□ -1.94
CHD9-209ENST00000564255 A0A087X0M5 115 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 A0A1B0GX30 115 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 VWA3AA6NCI4 1184 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 F5H697 171 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 CER1O95813 267 aa2.92□□□□□ -1.94
CHD9-209ENST00000564255 CYP21A2P08686 494 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms