RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CMA1P23946 247 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 GBP1P32455 592 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 KIR2DL1P43626 348 aaPredicted RBP22.2■■□□□ 1.14
CHD9-208ENST00000563410 ASPAP45381 313 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 PGFP49763 221 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 NDST1P52848 882 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 CREB5Q02930 508 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 USP39Q53GS9 565 aaKnown RBP22.2■■□□□ 1.14
CHD9-208ENST00000563410 EMC10Q5UCC4 262 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 PMS2CLQ68D20 193 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 SPOPLQ6IQ16 392 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 ALLCQ8N6M5 410 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 SLC2A14Q8TDB8 520 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 OTUB2Q96DC9 234 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 CHAMP1Q96JM3 812 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 CSNK1G1Q9HCP0 422 aa22.2■■□□□ 1.14
CHD9-208ENST00000563410 SGK1O00141 431 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 KLF8O95600 359 aaPredicted RBP22.19■■□□□ 1.14
CHD9-208ENST00000563410 CAVIN2O95810 425 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 ASS1P00966 412 aaKnown RBP22.19■■□□□ 1.14
CHD9-208ENST00000563410 RPN1P04843 607 aaKnown RBP22.19■■□□□ 1.14
CHD9-208ENST00000563410 BCKDHBP21953 392 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 TIE1P35590 1138 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 KDSRQ06136 332 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 ETFBKMTQ8IXQ9 262 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 C12orf29Q8N999 325 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 TXNDC5Q8NBS9 432 aaKnown RBP22.19■■□□□ 1.14
CHD9-208ENST00000563410 OLIG1Q8TAK6 271 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 TAF4BQ92750 862 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 DUSP9Q99956 384 aaKnown RBP22.19■■□□□ 1.14
CHD9-208ENST00000563410 ARHGEF4Q9NR80 690 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 USP25Q9UHP3 1055 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 TRAF3IP3Q9Y228 551 aa22.19■■□□□ 1.14
CHD9-208ENST00000563410 IKBKBO14920 756 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 HLA-DRAP01903 254 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 MYL1P05976 194 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 P4HA1P13674 534 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 KCNA4P22459 653 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 GRIA2P42262 883 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 MAP3K7CLP57077 242 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 GAD2Q05329 585 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 HSF5Q4G112 596 aaPredicted RBP22.18■■□□□ 1.14
CHD9-208ENST00000563410 CEP135Q66GS9 1140 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 UNC93AQ86WB7 457 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 BBS7Q8IWZ6 715 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 ZDHHC4Q9NPG8 344 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 FAM49BQ9NUQ9 324 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 SH3BP1Q9Y3L3 701 aa22.18■■□□□ 1.14
CHD9-208ENST00000563410 PRR29P0C7W0 189 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 TNFRSF4P43489 277 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 N4BP2L1Q5TBK1 243 aaPredicted RBP22.17■■□□□ 1.14
CHD9-208ENST00000563410 RNF43Q68DV7 783 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 C11orf74Q86VG3 221 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 TWNKQ96RR1 684 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 LSM14BQ9BX40 385 aaKnown RBP22.17■■□□□ 1.14
CHD9-208ENST00000563410 FRMD4BQ9Y2L6 1034 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 USP24Q9UPU5 2620 aa22.17■■□□□ 1.14
CHD9-208ENST00000563410 ASCC3Q8N3C0 2202 aaKnown RBP22.16■■□□□ 1.14
CHD9-208ENST00000563410 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.16■■□□□ 1.14
CHD9-208ENST00000563410 HHLA1C9JL84 531 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 MAPK13O15264 365 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 HOXC11O43248 304 aaPredicted RBP22.16■■□□□ 1.14
CHD9-208ENST00000563410 CALUO43852 315 aaPredicted RBP22.16■■□□□ 1.14
CHD9-208ENST00000563410 GREM1O60565 184 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 TLR5O60602 858 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 ADAM23O75077 832 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 IRF1P10914 325 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 PIK3CAP42336 1068 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 GPRIN1Q7Z2K8 1008 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 TTC30AQ86WT1 665 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 TMEM25Q86YD3 366 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 NAT16Q8N8M0 369 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 SPATA32Q96LK8 384 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 EDEM2Q9BV94 578 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 FBXO44Q9H4M3 255 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 APOBEC3GQ9HC16 384 aaKnown RBP22.16■■□□□ 1.14
CHD9-208ENST00000563410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.16■■□□□ 1.141e-6■■■■□ 22.4
CHD9-208ENST00000563410 SPHK2Q9NRA0 654 aa22.16■■□□□ 1.14
CHD9-208ENST00000563410 CEP295Q9C0D2 2601 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 FAM237AA0A1B0GTK4 181 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 TULP3O75386 442 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 ALDH1A2O94788 518 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 RHOBTB3O94955 611 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 TBX18O95935 607 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 P2RY2P41231 377 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 VAMP7P51809 220 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 INCA1Q0VD86 236 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 NFIL3Q16649 462 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 EOGTQ5NDL2 527 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 CLEC20AQ6ZU45 233 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 RLN3Q8WXF3 142 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 HNRNPABQ99729 332 aaKnown RBP22.15■■□□□ 1.14
CHD9-208ENST00000563410 KLF16Q9BXK1 252 aaPredicted RBP22.15■■□□□ 1.14
CHD9-208ENST00000563410 TLR8Q9NR97 1041 aaKnown RBP22.15■■□□□ 1.14
CHD9-208ENST00000563410 OSER1Q9NX31 292 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 HCN2Q9UL51 889 aa22.15■■□□□ 1.14
CHD9-208ENST00000563410 LNP1A1A4G5 178 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 TRIM24O15164 1050 aa22.14■■□□□ 1.13
CHD9-208ENST00000563410 KCNK5O95279 499 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms