RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF670Q9BS34 389 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 TMEM120BA0PK00 339 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 ZNF487B1APH4 448 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 GOLGA8MH3BSY2 632 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 H7C0C1 242 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 XPO1O14980 1071 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 FAM163BP0C2L3 166 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 CREB1P16220 341 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 TFE3P19532 575 aaPredicted RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 TKTP29401 623 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 ATP5OP48047 213 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 GAD2Q05329 585 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 HP1BP3Q5SSJ5 553 aaPredicted RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 SLC9A4Q6AI14 798 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 C1orf228Q6PIY5 440 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 CXCL17Q6UXB2 119 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 RSPH3Q86UC2 560 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 ZC3H18Q86VM9 953 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 CCDC13Q8IYE1 715 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 PLD5Q8N7P1 536 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 PCDH19Q8TAB3 1148 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 ZFP42Q96MM3 310 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 HNRNPABQ99729 332 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 PRMT1Q99873 361 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 UPF3AQ9H1J1 476 aaKnown RBP10.23□□□□□ -0.77
SMG1-205ENST00000561947 VPS37BQ9H9H4 285 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 TBK1Q9UHD2 729 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 ST3GAL5Q9UNP4 418 aa10.23□□□□□ -0.77
SMG1-205ENST00000561947 ANKRD65E5RJM6 399 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 E7ESA3 106 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 CYB561D2O14569 222 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 GCAP28676 217 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TMED2Q15363 201 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 MFSD14CQ5VZR4 134 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 CPLX4Q7Z7G2 160 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TDRPQ86YL5 185 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TRIB2Q92519 343 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 SENP6Q9GZR1 1112 aaPredicted RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 FAM105AQ9NUU6 356 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 SLC38A7Q9NVC3 462 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 ACTL7BQ9Y614 415 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TCRBV7S3A2A0A539 114 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 FOXO6A8MYZ6 492 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 BANF1O75531 89 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TMEM63AO94886 807 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 PGK1P00558 417 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 BRAFP15056 766 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 BCAR1P56945 870 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 BASP1P80723 227 aaKnown RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 DPYSL2Q16555 572 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 FNBP1LQ5T0N5 605 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 ANKMY2Q8IV38 441 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 HACE1Q8IYU2 909 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 FUKQ8N0W3 1084 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TAB3Q8N5C8 712 aaPredicted RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 MAML1Q92585 1016 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 WNT8BQ93098 351 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 TSPYL2Q9H2G4 693 aaPredicted RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 PPCSQ9HAB8 311 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 UBN1Q9NPG3 1134 aa10.22□□□□□ -0.77
SMG1-205ENST00000561947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.22□□□□□ -0.775e-11■□□□□ 10.3
SMG1-205ENST00000561947 XPO7Q9UIA9 1087 aaKnown RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 ZMYND8Q9ULU4 1186 aaPredicted RBP10.22□□□□□ -0.77
SMG1-205ENST00000561947 CFAP69A5D8W1 941 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 MEIS3P2A8K0S8 358 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 GABRDO14764 452 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 ATP2C2O75185 946 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 PTPN1P18031 435 aaKnown RBP10.21□□□□□ -0.77
SMG1-205ENST00000561947 L1CAMP32004 1257 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 NRLP54845 237 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 FCGRTP55899 365 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 GPX6P59796 221 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 RNASELQ05823 741 aaKnown RBP10.21□□□□□ -0.77
SMG1-205ENST00000561947 NR1H3Q13133 447 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 PPP6R3Q5H9R7 873 aaPredicted RBP10.21□□□□□ -0.77
SMG1-205ENST00000561947 EFHC1Q5JVL4 640 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 WSCD1Q658N2 575 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 C6orf89Q6UWU4 347 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 CAPN12Q6ZSI9 719 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 TADA2BQ86TJ2 420 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 PIGZQ86VD9 579 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 RTP4Q96DX8 246 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 SEC16BQ96JE7 1060 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 NRDE2Q9H7Z3 1164 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 USP29Q9HBJ7 922 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 SPC25Q9HBM1 224 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 KCNK9Q9NPC2 374 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 CHST12Q9NRB3 414 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 CLUHO75153 1309 aa10.21□□□□□ -0.77
SMG1-205ENST00000561947 POC1B-GALNT4F8VUJ3 575 aa10.21□□□□□ -0.78
SMG1-205ENST00000561947 CA12O43570 354 aa10.21□□□□□ -0.78
SMG1-205ENST00000561947 CHRNA1P02708 482 aa10.21□□□□□ -0.78
SMG1-205ENST00000561947 CTSHP09668 335 aa10.21□□□□□ -0.78
SMG1-205ENST00000561947 RARBP10826 455 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms