RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 NECTIN4Q96NY8 510 aa16.5■□□□□ 0.23
SPG7-204ENST00000561911 ATXN3LQ9H3M9 355 aa16.5■□□□□ 0.23
SPG7-204ENST00000561911 SPTLC3Q9NUV7 552 aa16.5■□□□□ 0.23
SPG7-204ENST00000561911 CHORDC1Q9UHD1 332 aaPredicted RBP16.5■□□□□ 0.23
SPG7-204ENST00000561911 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
SPG7-204ENST00000561911 MTCL1Q9Y4B5 1905 aaKnown RBP16.5■□□□□ 0.23
SPG7-204ENST00000561911 A0A1W2PQH9 124 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 E7ENQ6 273 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 GJA1P17302 382 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 CYLC1P35663 651 aaPredicted RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 PGFP49763 221 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 PSEN1P49768 467 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 YWHAGP61981 247 aaKnown RBP eCLIP16.49■□□□□ 0.23
SPG7-204ENST00000561911 CYP4F8P98187 520 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 ZNF268Q14587 947 aaPredicted RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 RAD9BQ6WBX8 426 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 DNAAF5Q86Y56 855 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 ITFG1Q8TB96 612 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 MRPS31Q92665 395 aaKnown RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 MCRS1Q96EZ8 462 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 PIWIL1Q96J94 861 aaKnown RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 VCPIP1Q96JH7 1222 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 NMUR1Q9HB89 426 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 TLR8Q9NR97 1041 aaKnown RBP16.49■□□□□ 0.23
SPG7-204ENST00000561911 WDR35Q9P2L0 1181 aa16.49■□□□□ 0.23
SPG7-204ENST00000561911 PATJQ8NI35 1801 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 ZNF263O14978 683 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 MBTPS2O43462 519 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 ABL1P00519 1130 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 LTFP02788 710 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 CEBPBP17676 345 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 SCNN1AP37088 669 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 SLC6A3Q01959 620 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 CBX2Q14781 532 aaPredicted RBP16.48■□□□□ 0.23
SPG7-204ENST00000561911 MTF1Q14872 753 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 TEAD2Q15562 447 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 ARHGAP15Q53QZ3 475 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 SNX30Q5VWJ9 437 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 SLC26A9Q7LBE3 791 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 ING5Q8WYH8 240 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 GOLGA1Q92805 767 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 FAM149B1Q96BN6 582 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 TRIM11Q96F44 468 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 PPP1R9BQ96SB3 815 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 POMKQ9H5K3 350 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 ASNSD1Q9NWL6 643 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 CLIC5Q9NZA1 410 aa16.48■□□□□ 0.23
SPG7-204ENST00000561911 EPN1Q9Y6I3 576 aaPredicted RBP16.48■□□□□ 0.23
SPG7-204ENST00000561911 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 NDUFA10O95299 355 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 LCA5LO95447 670 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 GLI1P08151 1106 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 MYBL1P10243 752 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 RRM1P23921 792 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 GSCP56915 257 aaPredicted RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 TAF5Q15542 800 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 EFHC1Q5JVL4 640 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 FAM102AQ5T9C2 384 aaPredicted RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 BSPRYQ5W0U4 402 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 BTBD8Q5XKL5 378 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 GET4Q7L5D6 327 aaPredicted RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 PHLDB2Q86SQ0 1253 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 ZNF653Q96CK0 615 aa16.47■□□□□ 0.23
SPG7-204ENST00000561911 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
SPG7-204ENST00000561911 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.47■□□□□ 0.23
SPG7-204ENST00000561911 NRDCO43847 1150 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 TLR5O60602 858 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 HSF2BPO75031 334 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 H2AFZP0C0S5 128 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 RALAP11233 206 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 RARGP13631 454 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 ABCB4P21439 1286 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 DDX6P26196 483 aaKnown RBP eCLIP16.46■□□□□ 0.23
SPG7-204ENST00000561911 TUBP50607 506 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 GALCP54803 685 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 YWHAZP63104 245 aaKnown RBP16.46■□□□□ 0.23
SPG7-204ENST00000561911 CCZ1BP86790 482 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 CCZ1P86791 482 aaPredicted RBP16.46■□□□□ 0.23
SPG7-204ENST00000561911 TFF2Q03403 129 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 SPA17Q15506 151 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 PUS10Q3MIT2 529 aaKnown RBP16.46■□□□□ 0.23
SPG7-204ENST00000561911 HECTD3Q5T447 861 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 STXBP5Q5T5C0 1151 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 GPR158Q5T848 1215 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 TXNDC8Q6A555 127 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 DNAJC24Q6P3W2 148 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 H2AFVQ71UI9 128 aa16.46■□□□□ 0.23
SPG7-204ENST00000561911 NPAS3Q8IXF0 933 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms