RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 LRRC8DQ7L1W4 858 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF512BQ96KM6 892 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 IQGAP3Q86VI3 1631 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 H2AFYO75367 372 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CTSHP09668 335 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CHRM3P20309 590 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CDK16Q00536 496 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PRAMEF18Q5VWM3 479 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 TLK2Q86UE8 772 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 TRIM69Q86WT6 500 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ZCCHC7Q8N3Z6 543 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 DAGLBQ8NCG7 672 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 TET3O43151 1660 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SDR42E2A6NKP2 422 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CFAP99D6REC4 459 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 KPNA4O00629 521 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 MFN2O95140 757 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PGM3O95394 542 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 FDFT1P37268 417 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 NUMBP49757 651 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 IL5RAQ01344 420 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 UTS2BQ765I0 119 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SCFD2Q8WU76 684 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 H2AFY2Q9P0M6 372 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PNMA8BQ9ULN7 279 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 RPS6KA4O75676 772 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 KRT36O76013 467 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PGK2P07205 417 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 BAATQ14032 418 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 STILQ15468 1287 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ARMCX4Q5H9R4 360 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 NARFQ9UHQ1 456 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 MYRFQ9Y2G1 1151 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 HEATR9A2RTY3 570 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 ITGA9Q13797 1035 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 NRF1Q16656 503 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 NAPEPLDQ6IQ20 393 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 B3GNT6Q6ZMB0 384 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 A0A1B0GW55 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF862O60290 1169 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L2P0CJ85 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L3P0CJ86 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L4P0CJ87 422 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L5P0CJ88 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L6P0CJ89 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4L7P0CJ90 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 EPHX2P34913 555 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 ELK3P41970 407 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 CSTF3Q12996 717 aaKnown RBP10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 MTFR1Q15390 333 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 TTC23LQ6PF05 361 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 RDM1Q8NG50 284 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 WDR60Q8WVS4 1066 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 ASZ1Q8WWH4 475 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 KAT2BQ92831 832 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 KCTD14Q9BQ13 255 aaPredicted RBP10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 KCND1Q9NSA2 647 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 DUX4Q9UBX2 424 aa10.52□□□□□ -0.72
GTF3C1-202ENST00000561623 PDZK1P1A8MUH7 402 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 SNX3O60493 162 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 BAIAP3O94812 1187 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PROSCO94903 275 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PROCP04070 461 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PECAM1P16284 738 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 ITGADQ13349 1161 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PTK6Q13882 451 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 TRIP4Q15650 581 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 CNGA2Q16280 664 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 AGAP9Q5VTM2 703 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 C4orf22Q6V702 233 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PGM2Q96G03 612 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 TRIM24O15164 1050 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PHGDHO43175 533 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 RPS6KA5O75582 802 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 TMEM62Q0P6H9 643 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 AMHR2Q16671 573 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 ZRANB3Q5FWF4 1079 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 NT5DC3Q86UY8 548 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 ZNF333Q96JL9 665 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 TMEM39AQ9NV64 488 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 ZSCAN32Q9NX65 697 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 SPATA31A6Q5VVP1 1343 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 PREX2Q70Z35 1606 aa10.52□□□□□ -0.73
GTF3C1-202ENST00000561623 SPTLC1O15269 473 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms