RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 BCAT1P54687 386 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ID2Q02363 134 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ZNF91Q05481 1191 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 SEC23BQ15437 767 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 TMTC4Q5T4D3 741 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 DAB2IPQ5VWQ8 1189 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ANO7Q6IWH7 933 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ZNF549Q6P9A3 640 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ZNF783Q6ZMS7 281 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ZBTB46Q86UZ6 589 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 LIX1LQ8IVB5 337 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 MEIS3Q99687 375 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 ZPBPQ9BS86 351 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 DPH1Q9BZG8 443 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 MS4A7Q9GZW8 240 aaPredicted RBP4.07□□□□□ -1.76
USP8-216ENST00000561206 SLC12A5Q9H2X9 1139 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 GBA2Q9HCG7 927 aaPredicted RBP4.07□□□□□ -1.76
USP8-216ENST00000561206 TMEM184CQ9NVA4 438 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 HEY2Q9UBP5 337 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 LPAR3Q9UBY5 353 aa4.07□□□□□ -1.76
USP8-216ENST00000561206 DRG1Q9Y295 367 aaKnown RBP4.07□□□□□ -1.76
USP8-216ENST00000561206 ME1P48163 572 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 COPB1P53618 953 aaKnown RBP4.06□□□□□ -1.76
USP8-216ENST00000561206 CTBP1Q13363 440 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 CCNIQ14094 377 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 FGL2Q14314 439 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 TMEM63BQ5T3F8 832 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 TMEM65Q6PI78 240 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 DCDC5Q6ZRR9 648 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 RAB11FIP4Q86YS3 637 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 SPARTQ8N0X7 666 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 ARFGAP1Q8N6T3 406 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 B4GALNT2Q8NHY0 566 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 DIS3LQ8TF46 1054 aaKnown RBP4.06□□□□□ -1.76
USP8-216ENST00000561206 IGFBPL1Q8WX77 278 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 RAPGEF4Q8WZA2 1011 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 PPP2R3CQ969Q6 453 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 CTHRC1Q96CG8 243 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 MLXIPQ9HAP2 919 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 SNX15Q9NRS6 342 aa4.06□□□□□ -1.76
USP8-216ENST00000561206 GAR1Q9NY12 217 aaKnown RBP4.06□□□□□ -1.76
USP8-216ENST00000561206 EVPLQ92817 2033 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 BTN3A1O00481 513 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 TNFRSF13BO14836 293 aaPredicted RBP4.05□□□□□ -1.76
USP8-216ENST00000561206 TULP3O75386 442 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 OFD1O75665 1012 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 PF4V1P10720 104 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 RPS13P62277 151 aaKnown RBP4.05□□□□□ -1.76
USP8-216ENST00000561206 ZNF267Q14586 743 aaPredicted RBP4.05□□□□□ -1.76
USP8-216ENST00000561206 ASIC2Q16515 512 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 PTCHD3Q3KNS1 767 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 DENND2CQ68D51 928 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 ANKRD13BQ86YJ7 626 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 DENND1CQ8IV53 801 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 OR6B3Q8NGW1 331 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 MAFAQ8NHW3 353 aaPredicted RBP4.05□□□□□ -1.76
USP8-216ENST00000561206 WDYHV1Q96HA8 205 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 VN1R3Q9BXE9 311 aa4.05□□□□□ -1.76
USP8-216ENST00000561206 H3BML4 177 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 SPRY2O43597 315 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 CTSAP10619 480 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 EPHA3P29320 983 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 SLC13A2Q13183 592 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 KCNB1Q14721 858 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 BRDTQ58F21 947 aaPredicted RBP4.04□□□□□ -1.76
USP8-216ENST00000561206 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 RANBP10Q6VN20 620 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 MPP5Q8N3R9 675 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
USP8-216ENST00000561206 DNAJB14Q8TBM8 379 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 ZFYVE19Q96K21 471 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 NT5C1BQ96P26 610 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 TRIM5Q9C035 493 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 ZSCAN32Q9NX65 697 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.04□□□□□ -1.76
USP8-216ENST00000561206 ANKRD6Q9Y2G4 727 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 CDY1Q9Y6F8 540 aa4.04□□□□□ -1.76
USP8-216ENST00000561206 A0A1W2PPL8 197 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 TMEM233B4DJY2 109 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 SRGAP2O75044 1071 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 ATF7P17544 494 aaPredicted RBP4.03□□□□□ -1.76
USP8-216ENST00000561206 HTR1BP28222 390 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 PRKAR1BP31321 381 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 MTHFSP49914 203 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 NEK2P51955 445 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 TIAL1Q01085 375 aaKnown RBP eCLIP4.03□□□□□ -1.76
USP8-216ENST00000561206 RAB32Q13637 225 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 IFIT1BQ5T764 474 aaKnown RBP4.03□□□□□ -1.76
USP8-216ENST00000561206 DCAF12L1Q5VU92 463 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 VSTM1Q6UX27 236 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.03□□□□□ -1.76
USP8-216ENST00000561206 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 HS6ST2Q96MM7 605 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 TMEM204Q9BSN7 226 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 SMURF2Q9HAU4 748 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 PCDH12Q9NPG4 1184 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 TRIM36Q9NQ86 728 aa4.03□□□□□ -1.76
USP8-216ENST00000561206 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms