RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SF3A2Q15428 464 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 CCDC6Q16204 474 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 PLA2G2CQ5R387 149 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 LY6G5CQ5SRR4 150 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 C12orf40Q86WS4 652 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 SFTPA1Q8IWL2 248 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 FAM186BQ8IYM0 893 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 CCDC33Q8N5R6 958 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TAS1R2Q8TE23 839 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TWNKQ96RR1 684 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 HNRNPABQ99729 332 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 IMPG2Q9BZV3 1241 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 NACA2Q9H009 215 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 DUSP15Q9H1R2 295 aaPredicted RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 CYP3A43Q9HB55 503 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 MMP17Q9ULZ9 603 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 SH3BP1Q9Y3L3 701 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TLR5O60602 858 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 APODP05090 189 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 FAM200BP0CF97 657 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TRIM21P19474 475 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 MCCD1P59942 119 aaPredicted RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 ELF2Q15723 593 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 CRY1Q16526 586 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 RASSF3Q86WH2 238 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 C12orf50Q8NA57 414 aaPredicted RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 NT5C1AQ9BXI3 368 aa17.15■□□□□ 0.34
SNX1-213ENST00000561026 TLR8Q9NR97 1041 aaKnown RBP17.15■□□□□ 0.34
SNX1-213ENST00000561026 EML5Q05BV3 1969 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 MYO16Q9Y6X6 1858 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 RHOBTB1O94844 696 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 CHRM1P11229 460 aaPredicted RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 ADORA2BP29275 332 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 MPLP40238 635 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 GRIA2P42262 883 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 KIR2DL1P43626 348 aaPredicted RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 LIMK1P53667 647 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 GAD2Q05329 585 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 AASDHQ4L235 1098 aaPredicted RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 USP39Q53GS9 565 aaKnown RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 CLEC20AQ6ZU45 233 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 BBS7Q8IWZ6 715 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 ALLCQ8N6M5 410 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 IL17RCQ8NAC3 791 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 CNOT6LQ96LI5 555 aaKnown RBP17.14■□□□□ 0.33
SNX1-213ENST00000561026 NIF3L1Q9GZT8 377 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 ARHGEF4Q9NR80 690 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 SCML2Q9UQR0 700 aa17.14■□□□□ 0.33
SNX1-213ENST00000561026 LAMA1P25391 3075 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 KIAA1549LQ6ZVL6 1849 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 HHLA1C9JL84 531 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 HOXC11O43248 304 aaPredicted RBP17.13■□□□□ 0.33
SNX1-213ENST00000561026 CILPO75339 1184 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 TBX18O95935 607 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 GTF2H1P32780 548 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 TNFRSF4P43489 277 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 EDRF1Q3B7T1 1238 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 HSF5Q4G112 596 aaPredicted RBP17.13■□□□□ 0.33
SNX1-213ENST00000561026 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 BTBD8Q5XKL5 378 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 ANO7Q6IWH7 933 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 GPRIN1Q7Z2K8 1008 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 TMEM25Q86YD3 366 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 ETFBKMTQ8IXQ9 262 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 PHTF2Q8N3S3 785 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 TXNDC5Q8NBS9 432 aaKnown RBP17.13■□□□□ 0.33
SNX1-213ENST00000561026 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 MDGA1Q8NFP4 955 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 WBP2Q969T9 261 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 KLF16Q9BXK1 252 aaPredicted RBP17.13■□□□□ 0.33
SNX1-213ENST00000561026 TPSD1Q9BZJ3 242 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 MMRN2Q9H8L6 949 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 GDPD2Q9HCC8 539 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 TMEM8AQ9HCN3 771 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 CYLDQ9NQC7 956 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 SPHK2Q9NRA0 654 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 VPS45Q9NRW7 570 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 RXFP3Q9NSD7 469 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 OSER1Q9NX31 292 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 INVSQ9Y283 1065 aa17.13■□□□□ 0.33
SNX1-213ENST00000561026 MYOFQ9NZM1 2061 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 CNOT1A5YKK6 2376 aaKnown RBP17.12■□□□□ 0.33
SNX1-213ENST00000561026 TPRP12270 2363 aaKnown RBP17.12■□□□□ 0.33
SNX1-213ENST00000561026 GREM1O60565 184 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 KLF8O95600 359 aaPredicted RBP17.12■□□□□ 0.33
SNX1-213ENST00000561026 IRF1P10914 325 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 HNRNPLP14866 589 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNX1-213ENST00000561026 CD58P19256 250 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 ACO1P21399 889 aaKnown RBP17.12■□□□□ 0.33
SNX1-213ENST00000561026 GBP1P32455 592 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 TIE1P35590 1138 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 ATP5C1P36542 298 aaKnown RBP17.12■□□□□ 0.33
SNX1-213ENST00000561026 KDSRQ06136 332 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
SNX1-213ENST00000561026 KRT39Q6A163 491 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms