RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 MIER2Q8N344 545 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 GLG1Q92896 1179 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 MTMR8Q96EF0 704 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 RITA1Q96K30 269 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 PTDSS2Q9BVG9 487 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-218ENST00000560236 TRNAU1APQ9NX07 287 aaKnown RBP4.32□□□□□ -1.72
LRRC28-218ENST00000560236 ZNF580Q9UK33 172 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 SSX2IPQ9Y2D8 614 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 AFG3L2Q9Y4W6 797 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 IFT172Q9UG01 1749 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 KIAA1210Q9ULL0 1709 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 CRYBG1Q9Y4K1 1723 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 TOPAZ1Q8N9V7 1692 aa4.32□□□□□ -1.72
LRRC28-218ENST00000560236 SBNO1A3KN83 1393 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 SPATA31A1Q5TZJ5 1347 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 A1L4Q6 167 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 H7C1Q1 480 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 SOCS2O14508 198 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 GABRDO14764 452 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 DCLK1O15075 740 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 EXOC3O60645 756 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 AHSGP02765 367 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 GUCY2FP51841 1108 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 HK3P52790 923 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 GPSM2P81274 684 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 MTMR1Q13613 665 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 IQCB1Q15051 598 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 TBC1D25Q3MII6 688 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 CERKLQ49MI3 558 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-218ENST00000560236 FCRL6Q6DN72 434 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 KIRREL2Q6UWL6 708 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 Q6ZWC4 215 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 PPP1R3BQ86XI6 285 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 PCSK9Q8NBP7 692 aaKnown RBP4.31□□□□□ -1.72
LRRC28-218ENST00000560236 ABHD11Q8NFV4 315 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 ADGRE3Q9BY15 652 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 EBF3Q9H4W6 596 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 STK32BQ9NY57 414 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 KLHL13Q9P2N7 655 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 PEAK1Q9H792 1746 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 ALS2Q96Q42 1657 aa4.31□□□□□ -1.72
LRRC28-218ENST00000560236 DHX57Q6P158 1386 aaKnown RBP4.3□□□□□ -1.72
LRRC28-218ENST00000560236 ANKRD30AQ9BXX3 1397 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 KNDC1Q76NI1 1749 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 E5RJQ4 531 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 POC1B-GALNT4F8VUJ3 575 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 USP1O94782 785 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 TOMM70O94826 608 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 FTLP02792 175 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-218ENST00000560236 TPTEP56180 551 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 LILRA4P59901 499 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 EXOSC9Q06265 439 aaKnown RBP4.3□□□□□ -1.72
LRRC28-218ENST00000560236 ODF1Q14990 250 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 SLC15A2Q16348 729 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 RGS7BPQ6MZT1 257 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-218ENST00000560236 MRPL10Q7Z7H8 261 aaKnown RBP4.3□□□□□ -1.72
LRRC28-218ENST00000560236 ZDHHC17Q8IUH5 632 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 GALNT4Q8N4A0 578 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 LMBRD1Q9NUN5 540 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 PCDHA1Q9Y5I3 950 aa4.3□□□□□ -1.72
LRRC28-218ENST00000560236 TRPM3Q9HCF6 1732 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 ADCY9O60503 1353 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 DTNBO60941 627 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 TJP3O95049 919 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 PDE8BO95263 885 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 FGBP02675 491 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 CHRM5P08912 532 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 TYRP14679 529 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 PDCP20941 246 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 ATP5F1P24539 256 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 IL1R2P27930 398 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 E2F2Q14209 437 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 PTPN21Q16825 1174 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 SERPINA13PQ6UXR4 307 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 NRACQ8N912 160 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 TERB1Q8NA31 727 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 PIGOQ8TEQ8 1089 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 FAM167AQ96KS9 214 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 FAM118BQ9BPY3 351 aa4.29□□□□□ -1.72
LRRC28-218ENST00000560236 SCAF8Q9UPN6 1271 aaKnown RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 THRAP3Q9Y2W1 955 aaKnown RBP4.29□□□□□ -1.72
LRRC28-218ENST00000560236 WNK3Q9BYP7 1800 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 ERC2O15083 957 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 KATNA1O75449 491 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 DLDP09622 509 aaKnown RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 CYP2A6P11509 494 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 CCND1P24385 295 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 CCKARP32238 428 aa4.28□□□□□ -1.72
LRRC28-218ENST00000560236 ZNF268Q14587 947 aaPredicted RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 L1TD1Q5T7N2 865 aaKnown RBP4.28□□□□□ -1.72
LRRC28-218ENST00000560236 SHC4Q6S5L8 630 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms