RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
RPL28-209ENST00000560055 A0A1W2PQH9 124 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 COCHO43405 550 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 TLR5O60602 858 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 ZBED1O96006 694 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 TCF3P15923 654 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 PSEN1P49768 467 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 RGS7P49802 495 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 UBASH3AP57075 661 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 GPC5P78333 572 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 ZXDBP98169 803 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 GRM2Q14416 872 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 ZNF77Q15935 545 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 ZNF276Q8N554 614 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 WDTC1Q8N5D0 677 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 BPIFB1Q8TDL5 484 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 EPS8L1Q8TE68 723 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 TRMT61BQ9BVS5 477 aaKnown RBP17.7■□□□□ 0.42
RPL28-209ENST00000560055 SLC4A5Q9BY07 1137 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 TTYH3Q9C0H2 523 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 CCSER2Q9H7U1 834 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.7■□□□□ 0.42
RPL28-209ENST00000560055 CLIC5Q9NZA1 410 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 ZNF318Q5VUA4 2279 aa17.7■□□□□ 0.42
RPL28-209ENST00000560055 MYO16Q9Y6X6 1858 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 ARNTLO00327 626 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 DPYSL4O14531 572 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 GFPT2O94808 682 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 DAOAP59103 153 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 USP4Q13107 963 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 KLHDC10Q6PID8 442 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 TRIM67Q6ZTA4 783 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 TMEM110Q86TL2 294 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 NOP9Q86U38 636 aaKnown RBP17.69■□□□□ 0.42
RPL28-209ENST00000560055 RNF214Q8ND24 703 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 BAP1Q92560 729 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 ZFRQ96KR1 1074 aaKnown RBP17.69■□□□□ 0.42
RPL28-209ENST00000560055 SPAG5Q96R06 1193 aa17.69■□□□□ 0.42
RPL28-209ENST00000560055 NOCTQ9UK39 431 aaKnown RBP17.69■□□□□ 0.42
RPL28-209ENST00000560055 CHADO15335 359 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
RPL28-209ENST00000560055 KRT9P35527 623 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 STAT1P42224 750 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 PDCLQ13371 301 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 FIGNQ5HY92 759 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 PASD1Q8IV76 773 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 SIX6OS1Q8N1H7 587 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 NDRG1Q92597 394 aaKnown RBP17.68■□□□□ 0.42
RPL28-209ENST00000560055 TRPV5Q9NQA5 729 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 IFNKQ9P0W0 207 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 WNT16Q9UBV4 365 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 KIF26AQ9ULI4 1882 aaPredicted RBP17.68■□□□□ 0.42
RPL28-209ENST00000560055 MYO6Q9UM54 1294 aa17.68■□□□□ 0.42
RPL28-209ENST00000560055 YJEFN3A6XGL0 299 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 E7ENQ6 273 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 FBXO21O94952 628 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 TBX18O95935 607 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 RARGP13631 454 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 LCP1P13796 627 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 GDI1P31150 447 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 ACADSBP45954 432 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 YWHAGP61981 247 aaKnown RBP eCLIP17.67■□□□□ 0.42
RPL28-209ENST00000560055 PFKPQ01813 784 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 ZNF677Q86XU0 584 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 KIAA1958Q8N8K9 716 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 SH3RF2Q8TEC5 729 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 IRGQQ8WZA9 623 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 DNASE1L2Q92874 299 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 IRF7Q92985 503 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 CPQQ9Y646 472 aa17.67■□□□□ 0.42
RPL28-209ENST00000560055 HELZP42694 1942 aaKnown RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 F5P12259 2224 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 TMEM221A6NGB7 291 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 E5RJQ4 531 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 M0R296 226 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 LEFTY2O00292 366 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 PIK3R2O00459 728 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 ZNF263O14978 683 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 MBL2P11226 248 aaPredicted RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 RALAP11233 206 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 CHRNB2P17787 502 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 PLCB2Q00722 1185 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 MTF1Q14872 753 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 ARHGAP29Q52LW3 1261 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 IER5LQ5T953 404 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 TAF3Q5VWG9 929 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 YAF2Q8IY57 180 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 C1orf131Q8NDD1 294 aaKnown RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 CLEC4CQ8WTT0 213 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 CPXM1Q96SM3 734 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 CDK5RAP1Q96SZ6 601 aaKnown RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 FAM83CQ9BQN1 747 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 EDEM3Q9BZQ6 932 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
RPL28-209ENST00000560055 BRD9Q9H8M2 597 aa17.66■□□□□ 0.42
RPL28-209ENST00000560055 ST7Q9NRC1 585 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms