RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TAF1BQ53T94 588 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-216ENST00000559819 GLRA4Q5JXX5 417 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 ANKRD13AQ8IZ07 590 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 CLEC4CQ8WTT0 213 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRRC28-216ENST00000559819 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-216ENST00000559819 CYTH2Q99418 400 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 SNRNP25Q9BV90 132 aaKnown RBP10.46□□□□□ -0.73
LRRC28-216ENST00000559819 PHACTR1Q9C0D0 580 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 PCDH18Q9HCL0 1135 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 TXLNGQ9NUQ3 528 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 FETUBQ9UGM5 382 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 ITGA11Q9UKX5 1188 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 KCNH4Q9UQ05 1017 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 NR2E3Q9Y5X4 410 aa10.46□□□□□ -0.73
LRRC28-216ENST00000559819 CXorf49A8MYA2 514 aaPredicted RBP10.46□□□□□ -0.74
LRRC28-216ENST00000559819 F5H423 210 aaPredicted RBP10.46□□□□□ -0.74
LRRC28-216ENST00000559819 APOL1O14791 398 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 LPXNO60711 386 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 NPTXRO95502 500 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 PYGBP11216 843 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 OSBPP22059 807 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 GJA5P36382 358 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 ACAP1Q15027 740 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 PPP6R3Q5H9R7 873 aaPredicted RBP10.46□□□□□ -0.74
LRRC28-216ENST00000559819 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 CCDC110Q8TBZ0 833 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 TTC17Q96AE7 1141 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 ZMAT2Q96NC0 199 aaKnown RBP10.46□□□□□ -0.74
LRRC28-216ENST00000559819 FAM111AQ96PZ2 611 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 PLAC1Q9HBJ0 212 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 SSU72Q9NP77 194 aaKnown RBP10.46□□□□□ -0.74
LRRC28-216ENST00000559819 SNTG2Q9NY99 539 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 TUBGCP4Q9UGJ1 667 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 TTLL3Q9Y4R7 772 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 HES2Q9Y543 173 aa10.46□□□□□ -0.74
LRRC28-216ENST00000559819 UGT1A9O60656 530 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 SKIV2L2P42285 1042 aaKnown RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 BCAR1P56945 870 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF200P98182 395 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 TFDP2Q14188 446 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 KIZQ2M2Z5 673 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 MTDHQ86UE4 582 aaKnown RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 CTAGE3PQ8IX95 158 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 PPM1NQ8N819 430 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 SLC44A1Q8WWI5 657 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 C18orf25Q96B23 403 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 SLC7A6OSQ96CW6 309 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 PRR11Q96HE9 360 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 C16orf70Q9BSU1 422 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 MROH8Q9H579 483 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 UGT1A7Q9HAW7 530 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 UGT1A10Q9HAW8 530 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 UGT1A8Q9HAW9 530 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 GJD2Q9UKL4 321 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 C2orf71A6NGG8 1288 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 PAPSS1O43252 624 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 ANP32DO95626 131 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 ZBED1O96006 694 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 INHBAP08476 426 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 ATP2A2P16615 1042 aaKnown RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 BGNP21810 368 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 STIP1P31948 543 aaKnown RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 NEK3P51956 506 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 PPIL2Q13356 520 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 LAMC2Q13753 1193 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 PAXIP1Q6ZW49 1069 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 NETO2Q8NC67 525 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 NCAPGQ9BPX3 1015 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 EIF2AQ9BY44 585 aaKnown RBP10.45□□□□□ -0.74
LRRC28-216ENST00000559819 MANSC1Q9H8J5 431 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 SMYD2Q9NRG4 433 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 MFHAS1Q9Y4C4 1052 aa10.45□□□□□ -0.74
LRRC28-216ENST00000559819 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 A0A0G2JND7 137 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 IQANK1A0A1B0GTG1 560 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ASB14A6NK59 587 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 CHADO15335 359 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 DCTN3O75935 186 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 C1QAP02745 245 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 SDC4P31431 198 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 HDAC4P56524 1084 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 POU5F1BQ06416 359 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 BMPR2Q13873 1038 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 PKDCCQ504Y2 493 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 MARCH8Q5T0T0 291 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 CDHR3Q6ZTQ4 885 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 SH2D5Q6ZV89 423 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 CAND1Q86VP6 1230 aaKnown RBP10.44□□□□□ -0.74
LRRC28-216ENST00000559819 C7orf31Q8N865 590 aa10.44□□□□□ -0.74
LRRC28-216ENST00000559819 GIMAP7Q8NHV1 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms