RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 H2AFVQ71UI9 128 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
TMED3-205ENST00000558562 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 CD302Q8IX05 232 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 TRIM58Q8NG06 486 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 ZNF461Q8TAF7 563 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 ARID3AQ99856 593 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 IER2Q9BTL4 223 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 NIF3L1Q9GZT8 377 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 CYP4F11Q9HBI6 524 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 C2orf42Q9NWW7 574 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 INTUQ9ULD6 942 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 PCDHB4Q9Y5E5 795 aa14.28□□□□□ -0.12
TMED3-205ENST00000558562 FAM208BQ5VWN6 2430 aa14.27□□□□□ -0.12
TMED3-205ENST00000558562 BTNL10A8MVZ5 291 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 K7ESF4 209 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 ZNF197O14709 1029 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 ABLIM3O94929 683 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 CST3P01034 146 aaPredicted RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 KRT19P08727 400 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 CYP11B1P15538 503 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 PMLP29590 882 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 SOX9P48436 509 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 SF3A2Q15428 464 aaKnown RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 UPP1Q16831 310 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 AASDHQ4L235 1098 aaPredicted RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 TAF3Q5VWG9 929 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 Q6ZS52 159 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 PDZD4Q76G19 769 aaPredicted RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 SLC47A2Q86VL8 602 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 RNF10Q8N5U6 811 aaKnown RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 TAF4BQ92750 862 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 SMARCD2Q92925 531 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 PPP1R10Q96QC0 940 aaKnown RBP14.27□□□□□ -0.13
TMED3-205ENST00000558562 RXFP3Q9NSD7 469 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 C2CD2Q9Y426 696 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 CAPN6Q9Y6Q1 641 aa14.27□□□□□ -0.13
TMED3-205ENST00000558562 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 TRAPPC3O43617 180 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 BUB1O43683 1085 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 MOSPD3O75425 235 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 CHRNB2P17787 502 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 ACO1P21399 889 aaKnown RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 NAP1L1P55209 391 aaKnown RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 BPIFB4P59827 614 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 YWHAEP62258 255 aaKnown RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 CDR2Q01850 454 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 IFI16Q16666 785 aaKnown RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 CYP4A22Q5TCH4 519 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SLC8B1Q6J4K2 584 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 CEP68Q76N32 757 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 LONP2Q86WA8 852 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SPEM1Q8N4L4 309 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 UBR7Q8N806 425 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 C1orf127Q8N9H9 656 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 RBBP8NLQ8NC74 664 aaPredicted RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 TTC8Q8TAM2 541 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 ZSCAN18Q8TBC5 510 aaPredicted RBP14.26□□□□□ -0.13
TMED3-205ENST00000558562 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 PLEKHA5Q9HAU0 1116 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 TRPV5Q9NQA5 729 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SIX4Q9UIU6 781 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 DERAQ9Y315 318 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 INSL5Q9Y5Q6 135 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 MRFAP1Q9Y605 127 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 ASPMQ8IZT6 3477 aa14.26□□□□□ -0.13
TMED3-205ENST00000558562 A0A0A6YYK5 440 aaPredicted RBP14.25□□□□□ -0.13
TMED3-205ENST00000558562 ARNTLO00327 626 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 AXIN1O15169 862 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 ITGB3P05106 788 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 MMEP08473 750 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 TMEM253P0C7T8 217 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 MYL4P12829 197 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 ATF2P15336 505 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 GALCP54803 685 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 FMO1Q01740 532 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 SOX4Q06945 474 aaPredicted RBP14.25□□□□□ -0.13
TMED3-205ENST00000558562 TUBB2AQ13885 445 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 COL9A2Q14055 689 aaPredicted RBP14.25□□□□□ -0.13
TMED3-205ENST00000558562 ZNF667Q5HYK9 610 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 TMEM270Q6UE05 265 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 SCARA5Q6ZMJ2 495 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 ZNF677Q86XU0 584 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 DNAAF5Q86Y56 855 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 TCEAL8Q8IYN2 117 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
TMED3-205ENST00000558562 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
TMED3-205ENST00000558562 RSPRY1Q96DX4 576 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 TUBB2BQ9BVA1 445 aa14.25□□□□□ -0.13
TMED3-205ENST00000558562 XYLT2Q9H1B5 865 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms