RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 STARD3Q14849 445 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 EFHC1Q5JVL4 640 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 LLGL2Q6P1M3 1020 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 DEFB107AQ8IZN7 70 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 ATG16L2Q8NAA4 619 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 RNFT2Q96EX2 444 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 OLFM1Q99784 485 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 TAGLN3Q9UI15 199 aa14.4□□□□□ -0.11
SPG11-210ENST00000558319 KIF1BO60333 1816 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 HEATR9A2RTY3 570 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 KATNA1O75449 491 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 TNFRSF21O75509 655 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 FGFR3P22607 806 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 FAM45BPQ6NSW5 357 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 B3GALNT2Q8NCR0 500 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 NT5C1AQ9BXI3 368 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 RNF112Q9ULX5 631 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 TMC2Q8TDI7 906 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 MED15Q96RN5 788 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 MRGBPQ9NV56 204 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 C17orf102A2RUQ5 167 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 SGPL1O95470 568 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 ALOX15P16050 662 aaPredicted RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 GPD1P21695 349 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 TBCELQ5QJ74 424 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 UTP15Q8TED0 518 aaKnown RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 PARK7Q99497 189 aaKnown RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 TRIM9Q9C026 710 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 RRAGCQ9HB90 399 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 AHCYL1O43865 530 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 EIF2S1P05198 315 aaKnown RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 ADSSL1Q8N142 457 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 CHST12Q9NRB3 414 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 DDIT4Q9NX09 232 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 PTGES3LE9PB15 166 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 PSMD3O43242 534 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 CNOT3O75175 753 aaKnown RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 STK4Q13043 487 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 KRT78Q8N1N4 520 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 FBXO36Q8NEA4 188 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 ZSCAN18Q8TBC5 510 aaPredicted RBP14.39□□□□□ -0.11
SPG11-210ENST00000558319 SEPT1Q8WYJ6 367 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 TRIM63Q969Q1 353 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
SPG11-210ENST00000558319 SSU72P8A0A1W2PR75 194 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 B3GAT3O94766 335 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 RRM2P31350 389 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 SV2CQ496J9 727 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 ARMC3Q5W041 872 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 C16orf59Q7L2K0 433 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 WDR36Q8NI36 951 aaKnown RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 ENKURQ8TC29 256 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 DEFB129Q9H1M3 183 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 IARS2Q9NSE4 1012 aaKnown RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 TMEM51Q9NW97 253 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 GPC1P35052 558 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 RNF148Q8N7C7 305 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 KCTD14Q9BQ13 255 aaPredicted RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 GRIP2Q9C0E4 1043 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 THAP2Q9H0W7 228 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 GPRC5DQ9NZD1 345 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 IGFBP4P22692 258 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TALDO1P37837 337 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 PRR5LQ6MZQ0 368 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 DEFB132Q7Z7B7 95 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TRPC4APQ8TEL6 797 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 IPCEF1Q8WWN9 437 aaPredicted RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 KLHL1Q9NR64 748 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 PDXKO00764 312 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TRIM62Q9BVG3 475 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TEX13BQ9BXU2 312 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 AVENQ9NQS1 362 aaPredicted RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 SMPD4Q9NXE4 827 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 ZNF624Q9P2J8 865 aaPredicted RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TK2O00142 265 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 RAG1P15918 1043 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 ZNF543Q08ER8 600 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 NDUFA5Q16718 116 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 C11orf63Q6NUN7 778 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TFAP2DQ7Z6R9 452 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 OOSP2Q86WS3 158 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
SPG11-210ENST00000558319 ANKS1AQ92625 1134 aa14.38□□□□□ -0.11
SPG11-210ENST00000558319 TUFT1Q9NNX1 390 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms