RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 POMGNT1Q8WZA1 660 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 SLITRK1Q96PX8 696 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 PLIN2Q99541 437 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 PKMYT1Q99640 499 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ZHX3Q9H4I2 956 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 GAREM1Q9H706 876 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 ZDHHC4Q9NPG8 344 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 TM7SF3Q9NS93 570 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 SMPD4Q9NXE4 827 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 GDAP2Q9NXN4 497 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 CFAP97Q9P2B7 532 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 CDH9Q9ULB4 789 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 L1RE1Q9UN81 338 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 SH3BP1Q9Y3L3 701 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 NFE2L3Q9Y4A8 694 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 SNX9Q9Y5X1 595 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 STYXL1Q9Y6J8 313 aa5.53□□□□□ -1.52
SPG11-208ENST00000558155 HELZP42694 1942 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 A0A1W2PQF6 199 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 MEI4A8MW99 385 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 GFRA2O00451 464 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 GABRDO14764 452 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 BCAT2O15382 392 aaPredicted RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 FLRT2O43155 660 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 RRP8O43159 456 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 SLC26A4O43511 780 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 TNFSF14O43557 240 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CILPO75339 1184 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 TULP3O75386 442 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 OLFM2O95897 454 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 PRB1P04280 392 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ITGB3P05106 788 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 KRT19P08727 400 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ATXN1LP0C7T5 689 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 PLCG1P19174 1290 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 BDNFP23560 247 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 YWHAQP27348 245 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CD6P30203 668 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 POLR2BP30876 1174 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 TOB1P50616 345 aaPredicted RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 NEK4P51957 841 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 NOP14P78316 857 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 HMGN5P82970 282 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 CYP27A1Q02318 531 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 MESP2Q0VG99 397 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 TAF10Q12962 218 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 MYO1EQ12965 1108 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 GRIK2Q13002 908 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 DHX8Q14562 1220 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 E2F5Q15329 346 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 HLA-BQ31612 363 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ANO4Q32M45 955 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 HECTD3Q5T447 861 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 GRAMD4Q6IC98 578 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 SLC39A4Q6P5W5 647 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CRELD2Q6UXH1 353 aaPredicted RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 DBX2Q6ZNG2 339 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 METTL3Q86U44 580 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 OSTM1Q86WC4 334 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 GPBP1Q86WP2 473 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ADGRF2Q8IZF7 708 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 PHTF2Q8N3S3 785 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 KRI1Q8N9T8 703 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 TERB1Q8NA31 727 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CADM4Q8NFZ8 388 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 DNASE2BQ8WZ79 361 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CALML4Q96GE6 196 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 C8orf48Q96LL4 319 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 XPO6Q96QU8 1125 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 SYT15Q9BQS2 421 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 REEP2Q9BRK0 252 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 LLPHQ9BRT6 129 aaKnown RBP5.52□□□□□ -1.53
SPG11-208ENST00000558155 TTLL2Q9BWV7 592 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 MIR1-1HGQ9H1L0 117 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ITM2CQ9NQX7 267 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 SPHK2Q9NRA0 654 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 WDR35Q9P2L0 1181 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 ITGA11Q9UKX5 1188 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 EXOC7Q9UPT5 735 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 PCDHGB2Q9Y5G2 931 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 RAI2Q9Y5P3 530 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 TSC2P49815 1807 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 CABIN1Q9Y6J0 2220 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 APC2O95996 2303 aa5.52□□□□□ -1.53
SPG11-208ENST00000558155 METTL12A8MUP2 240 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 J3QKU1 62 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 HOXC11O43248 304 aaPredicted RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 MAP3K7O43318 606 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 ATP2C2O75185 946 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 TBCAO75347 108 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 DKK1O94907 266 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 RTN3O95197 1032 aaPredicted RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 OAS1P00973 400 aaKnown RBP5.51□□□□□ -1.53
SPG11-208ENST00000558155 PDGFRBP09619 1106 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 FAM163BP0C2L3 166 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 CDK4P11802 303 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 NCAM1P13591 858 aa5.51□□□□□ -1.53
SPG11-208ENST00000558155 HLA-EP13747 358 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms