RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GSDMDP57764 484 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 YWHAGP61981 247 aaKnown RBP eCLIP22.33■■□□□ 1.17
CASC4-204ENST00000557945 MRPS5P82675 430 aaKnown RBP22.33■■□□□ 1.17
CASC4-204ENST00000557945 CDK17Q00537 523 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 MAPK8IP2Q13387 824 aaPredicted RBP22.33■■□□□ 1.17
CASC4-204ENST00000557945 STXBP5Q5T5C0 1151 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 TXNDC8Q6A555 127 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 SCD5Q86SK9 330 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 SCML4Q8N228 414 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 IRGQQ8WZA9 623 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 GOLGA1Q92805 767 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 FGF13Q92913 245 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 MCRS1Q96EZ8 462 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 NHEJ1Q9H9Q4 299 aaPredicted RBP22.33■■□□□ 1.17
CASC4-204ENST00000557945 NMUR1Q9HB89 426 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.33■■□□□ 1.17
CASC4-204ENST00000557945 ADAM22Q9P0K1 906 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 ZNF638Q14966 1978 aaKnown RBP22.32■■□□□ 1.16
CASC4-204ENST00000557945 A0A087X0T9 212 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 YJEFN3A6XGL0 299 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 E7ENQ6 273 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 SART1O43290 800 aaKnown RBP22.32■■□□□ 1.16
CASC4-204ENST00000557945 AKR1B10O60218 316 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 ZDHHC11BP0C7U3 371 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 FAM228BP0C875 321 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 PPP1R2P3Q6NXS1 205 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 FAM183BPQ6ZVS7 135 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 PHLDB2Q86SQ0 1253 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 PHF13Q86YI8 300 aaPredicted RBP22.32■■□□□ 1.16
CASC4-204ENST00000557945 NPAS3Q8IXF0 933 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 FAM149B1Q96BN6 582 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 MYADMQ96S97 322 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 PHF7Q9BWX1 381 aaPredicted RBP22.32■■□□□ 1.16
CASC4-204ENST00000557945 TASP1Q9H6P5 420 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 CDH7Q9ULB5 785 aa22.32■■□□□ 1.16
CASC4-204ENST00000557945 C2orf78A6NCI8 922 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 FTLP02792 175 aaPredicted RBP22.31■■□□□ 1.16
CASC4-204ENST00000557945 CALB1P05937 261 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 GABRB2P47870 512 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 PSEN1P49768 467 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 HECTD3Q5T447 861 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 OTOP3Q7RTS5 596 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 BHLHA9Q7RTU4 235 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 DNAAF5Q86Y56 855 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 MAB21L3Q8N8X9 362 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 ATXN2LQ8WWM7 1075 aaKnown RBP22.31■■□□□ 1.16
CASC4-204ENST00000557945 RPGRIP1Q96KN7 1286 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 OSER1Q9NX31 292 aa22.31■■□□□ 1.16
CASC4-204ENST00000557945 MYO16Q9Y6X6 1858 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 GOLGA8SH3BPF8 625 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 RTN2O75298 545 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 RALAP11233 206 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 GZMAP12544 262 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 RARGP13631 454 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 DDX6P26196 483 aaKnown RBP eCLIP22.3■■□□□ 1.16
CASC4-204ENST00000557945 GFPT1Q06210 699 aaPredicted RBP22.3■■□□□ 1.16
CASC4-204ENST00000557945 C1QBPQ07021 282 aaKnown RBP22.3■■□□□ 1.16
CASC4-204ENST00000557945 CCDC122Q5T0U0 273 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 SNX30Q5VWJ9 437 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 BSPRYQ5W0U4 402 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 BTBD8Q5XKL5 378 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 TOGARAM2Q6ZUX3 1019 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 HFE2Q6ZVN8 426 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 XYLT1Q86Y38 959 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 ZDHHC17Q8IUH5 632 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 ACSF2Q96CM8 615 aaPredicted RBP22.3■■□□□ 1.16
CASC4-204ENST00000557945 ZSWIM3Q96MP5 696 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 SLC46A2Q9BY10 475 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 NACA2Q9H009 215 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 SPTBN5Q9NRC6 3674 aaKnown RBP22.3■■□□□ 1.16
CASC4-204ENST00000557945 PRUNE2Q8WUY3 3088 aa22.3■■□□□ 1.16
CASC4-204ENST00000557945 TRAV19A0A0A6YYK7 116 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 TLR5O60602 858 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 LTFP02788 710 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 SLC6A3Q01959 620 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 SLC18A3Q16572 532 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 EFHC1Q5JVL4 640 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 FAM102AQ5T9C2 384 aaPredicted RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 ALKBH5Q6P6C2 394 aaKnown RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 OLFML1Q6UWY5 402 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 MON1BQ7L1V2 547 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 RSRC2Q7L4I2 434 aaKnown RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 TMTC1Q8IUR5 882 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 MCOLN2Q8IZK6 566 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 ARL14EPQ8N8R7 260 aaPredicted RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 TDRD5Q8NAT2 981 aaKnown RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 EDEM1Q92611 657 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 PIWIL1Q96J94 861 aaKnown RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 BAG1Q99933 345 aaPredicted RBP22.29■■□□□ 1.16
CASC4-204ENST00000557945 CCSER2Q9H7U1 834 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 SPTLC3Q9NUV7 552 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 CLIC5Q9NZA1 410 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 GDE1Q9NZC3 331 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 STRIP2Q9ULQ0 834 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 NR2E1Q9Y466 385 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 XIRP2A4UGR9 3374 aa22.29■■□□□ 1.16
CASC4-204ENST00000557945 GRAP2O75791 330 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 HDCP19113 662 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 PTP4A2Q12974 167 aa22.28■■□□□ 1.16
CASC4-204ENST00000557945 ZNF268Q14587 947 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms