RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DOCK8Q8NF50 2099 aa15.07■□□□□ 0
USP3-205ENST00000557884 LRRC53A6NM62 1247 aa15.06■□□□□ 0
USP3-205ENST00000557884 YJEFN3A6XGL0 299 aa15.06■□□□□ 0
USP3-205ENST00000557884 SOBPA7XYQ1 873 aa15.06■□□□□ 0
USP3-205ENST00000557884 E5RJQ4 531 aa15.06■□□□□ 0
USP3-205ENST00000557884 E7ENQ6 273 aa15.06■□□□□ 0
USP3-205ENST00000557884 MDM4O15151 490 aa15.06■□□□□ 0
USP3-205ENST00000557884 RARGP13631 454 aa15.06■□□□□ 0
USP3-205ENST00000557884 CHRNB2P17787 502 aa15.06■□□□□ 0
USP3-205ENST00000557884 WEE1P30291 646 aa15.06■□□□□ 0
USP3-205ENST00000557884 GDI1P31150 447 aa15.06■□□□□ 0
USP3-205ENST00000557884 DAOAP59103 153 aa15.06■□□□□ 0
USP3-205ENST00000557884 YWHAGP61981 247 aaKnown RBP eCLIP15.06■□□□□ 0
USP3-205ENST00000557884 GPC5P78333 572 aa15.06■□□□□ 0
USP3-205ENST00000557884 ZXDAP98168 799 aa15.06■□□□□ 0
USP3-205ENST00000557884 PM20D1Q6GTS8 502 aa15.06■□□□□ 0
USP3-205ENST00000557884 MFSD6LQ8IWD5 586 aa15.06■□□□□ 0
USP3-205ENST00000557884 SCUBE3Q8IX30 993 aa15.06■□□□□ 0
USP3-205ENST00000557884 YAF2Q8IY57 180 aa15.06■□□□□ 0
USP3-205ENST00000557884 CELF5Q8N6W0 485 aaKnown RBP15.06■□□□□ 0
USP3-205ENST00000557884 SH3RF2Q8TEC5 729 aa15.06■□□□□ 0
USP3-205ENST00000557884 CPLX3Q8WVH0 158 aa15.06■□□□□ 0
USP3-205ENST00000557884 PPP1R13BQ96KQ4 1090 aa15.06■□□□□ 0
USP3-205ENST00000557884 CPXM1Q96SM3 734 aa15.06■□□□□ 0
USP3-205ENST00000557884 SLC4A5Q9BY07 1137 aa15.06■□□□□ 0
USP3-205ENST00000557884 LHX5Q9H2C1 402 aa15.06■□□□□ 0
USP3-205ENST00000557884 EPHX3Q9H6B9 360 aa15.06■□□□□ 0
USP3-205ENST00000557884 CNGB3Q9NQW8 809 aa15.06■□□□□ 0
USP3-205ENST00000557884 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.06■□□□□ 0
USP3-205ENST00000557884 DUSP12Q9UNI6 340 aa15.06■□□□□ 0
USP3-205ENST00000557884 SCAMP3O14828 347 aaKnown RBP15.05■□□□□ -0
USP3-205ENST00000557884 AP5Z1O43299 807 aa15.05■□□□□ -0
USP3-205ENST00000557884 OLFM2O95897 454 aa15.05■□□□□ -0
USP3-205ENST00000557884 RALAP11233 206 aa15.05■□□□□ -0
USP3-205ENST00000557884 SRFP11831 508 aa15.05■□□□□ -0
USP3-205ENST00000557884 ALADP13716 330 aa15.05■□□□□ -0
USP3-205ENST00000557884 FERP16591 822 aa15.05■□□□□ -0
USP3-205ENST00000557884 PSMC3P17980 439 aa15.05■□□□□ -0
USP3-205ENST00000557884 ACADSBP45954 432 aa15.05■□□□□ -0
USP3-205ENST00000557884 TUBP50607 506 aa15.05■□□□□ -0
USP3-205ENST00000557884 SLC7A9P82251 487 aa15.05■□□□□ -0
USP3-205ENST00000557884 ZXDBP98169 803 aa15.05■□□□□ -0
USP3-205ENST00000557884 FMO1Q01740 532 aa15.05■□□□□ -0
USP3-205ENST00000557884 CDR2Q01850 454 aa15.05■□□□□ -0
USP3-205ENST00000557884 ZNF268Q14587 947 aaPredicted RBP15.05■□□□□ -0
USP3-205ENST00000557884 ASIC2Q16515 512 aa15.05■□□□□ -0
USP3-205ENST00000557884 C10orf120Q5SQS8 335 aa15.05■□□□□ -0
USP3-205ENST00000557884 E4F1Q66K89 784 aaPredicted RBP15.05■□□□□ -0
USP3-205ENST00000557884 HFE2Q6ZVN8 426 aa15.05■□□□□ -0
USP3-205ENST00000557884 UBALD2Q8IYN6 164 aa15.05■□□□□ -0
USP3-205ENST00000557884 ARHGAP18Q8N392 663 aa15.05■□□□□ -0
USP3-205ENST00000557884 TMEM35BQ8NCS4 154 aa15.05■□□□□ -0
USP3-205ENST00000557884 BPIFB1Q8TDL5 484 aa15.05■□□□□ -0
USP3-205ENST00000557884 STK32AQ8WU08 396 aa15.05■□□□□ -0
USP3-205ENST00000557884 DEPDC1BQ8WUY9 529 aa15.05■□□□□ -0
USP3-205ENST00000557884 EDEM1Q92611 657 aa15.05■□□□□ -0
USP3-205ENST00000557884 E2F7Q96AV8 911 aa15.05■□□□□ -0
USP3-205ENST00000557884 ZFYVE19Q96K21 471 aa15.05■□□□□ -0
USP3-205ENST00000557884 NOX5Q96PH1 765 aa15.05■□□□□ -0
USP3-205ENST00000557884 TRMT61BQ9BVS5 477 aaKnown RBP15.05■□□□□ -0
USP3-205ENST00000557884 SYNCQ9H7C4 482 aa15.05■□□□□ -0
USP3-205ENST00000557884 BRD9Q9H8M2 597 aa15.05■□□□□ -0
USP3-205ENST00000557884 KIF9Q9HAQ2 790 aa15.05■□□□□ -0
USP3-205ENST00000557884 CYLDQ9NQC7 956 aa15.05■□□□□ -0
USP3-205ENST00000557884 SEPT11Q9NVA2 429 aaKnown RBP15.05■□□□□ -0
USP3-205ENST00000557884 MYO6Q9UM54 1294 aa15.05■□□□□ -0
USP3-205ENST00000557884 ARHGAP26Q9UNA1 814 aa15.05■□□□□ -0
USP3-205ENST00000557884 PI4K2BG5E9Z4 385 aa15.04■□□□□ -0
USP3-205ENST00000557884 LEFTY2O00292 366 aa15.04■□□□□ -0
USP3-205ENST00000557884 PAPSS1O43252 624 aaPredicted RBP15.04■□□□□ -0
USP3-205ENST00000557884 FBXO21O94952 628 aa15.04■□□□□ -0
USP3-205ENST00000557884 IRF1P10914 325 aa15.04■□□□□ -0
USP3-205ENST00000557884 PFKLP17858 780 aa15.04■□□□□ -0
USP3-205ENST00000557884 RPL34P49207 117 aaKnown RBP15.04■□□□□ -0
USP3-205ENST00000557884 PSEN1P49768 467 aa15.04■□□□□ -0
USP3-205ENST00000557884 EFEMP1Q12805 493 aa15.04■□□□□ -0
USP3-205ENST00000557884 USP4Q13107 963 aa15.04■□□□□ -0
USP3-205ENST00000557884 ZNF77Q15935 545 aa15.04■□□□□ -0
USP3-205ENST00000557884 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
USP3-205ENST00000557884 NAA35Q5VZE5 725 aa15.04■□□□□ -0
USP3-205ENST00000557884 BSPRYQ5W0U4 402 aa15.04■□□□□ -0
USP3-205ENST00000557884 BTBD8Q5XKL5 378 aa15.04■□□□□ -0
USP3-205ENST00000557884 RSRC2Q7L4I2 434 aaKnown RBP15.04■□□□□ -0
USP3-205ENST00000557884 TMEM110Q86TL2 294 aa15.04■□□□□ -0
USP3-205ENST00000557884 ZNF677Q86XU0 584 aa15.04■□□□□ -0
USP3-205ENST00000557884 CPA5Q8WXQ8 436 aa15.04■□□□□ -0
USP3-205ENST00000557884 EDAQ92838 391 aa15.04■□□□□ -0
USP3-205ENST00000557884 NUP58Q9BVL2 599 aa15.04■□□□□ -0
USP3-205ENST00000557884 GKN1Q9NS71 199 aa15.04■□□□□ -0
USP3-205ENST00000557884 OBP2AQ9NY56 170 aa15.04■□□□□ -0
USP3-205ENST00000557884 CLIC5Q9NZA1 410 aa15.04■□□□□ -0
USP3-205ENST00000557884 CFAP97Q9P2B7 532 aa15.04■□□□□ -0
USP3-205ENST00000557884 FBXL21Q9UKT6 434 aa15.04■□□□□ -0
USP3-205ENST00000557884 ZNF263O14978 683 aa15.03■□□□□ -0
USP3-205ENST00000557884 ERBB2P04626 1255 aa15.03■□□□□ -0
USP3-205ENST00000557884 GYPCP04921 128 aa15.03■□□□□ -0
USP3-205ENST00000557884 ATP5C1P36542 298 aaKnown RBP15.03■□□□□ -0
USP3-205ENST00000557884 FCHO2Q0JRZ9 810 aa15.03■□□□□ -0
USP3-205ENST00000557884 MTF1Q14872 753 aa15.03■□□□□ -0
USP3-205ENST00000557884 C2CD6Q53TS8 623 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms