RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ZSCAN5CA6NGD5 496 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 E5RJQ4 531 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 SART1O43290 800 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 B4GALT3O60512 393 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 HUS1O60921 280 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 GLI1P08151 1106 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 FAM163BP0C2L3 166 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 MYBL2P10244 700 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 RARAP10276 462 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 CCL5P13501 91 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 SELPP16109 830 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 HOXB4P17483 251 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 RPL9P32969 192 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 RFC1P35251 1148 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 RGS7P49802 495 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 SEC13P55735 322 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 RWDD2BP57060 319 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 TAP1Q03518 808 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 PDE4CQ08493 712 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 LLGL1Q15334 1064 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 STILQ15468 1287 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 TRADDQ15628 312 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 ATP13A4Q4VNC1 1196 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 CLLU1OSQ5K130 101 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 SH3PXD2AQ5TCZ1 1133 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 TXNRD3NBQ6F5E7 133 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 TRNP1Q6NT89 227 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 CCNI2Q6ZMN8 369 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 FAM183BPQ6ZVS7 135 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 PAQR9Q6ZVX9 377 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 LRRC8DQ7L1W4 858 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 ADAT2Q7Z6V5 191 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 SLC13A5Q86YT5 568 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 GSPT2Q8IYD1 628 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 EMC1Q8N766 993 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 NIPA2Q8N8Q9 360 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 PRELID2Q8N945 189 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 ANKRD52Q8NB46 1076 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 APPL2Q8NEU8 664 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 HNRNPLLQ8WVV9 542 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 PGBD4Q96DM1 585 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 PIWIL1Q96J94 861 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 PPP1R12CQ9BZL4 782 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 DDX47Q9H0S4 455 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 SNX25Q9H3E2 840 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 PLEKHA4Q9H4M7 779 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 GDF3Q9NR23 364 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 METTL5Q9NRN9 209 aaKnown RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 WDR35Q9P2L0 1181 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 STRIP2Q9ULQ0 834 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 USTQ9Y2C2 406 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 TIMM13Q9Y5L4 95 aaPredicted RBP7.76□□□□□ -1.17
SPG11-204ENST00000557866 MYH10P35580 1976 aa7.76□□□□□ -1.17
SPG11-204ENST00000557866 RALGAPA2Q2PPJ7 1873 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 F8W810 466 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 CCDC188H7C350 402 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 I3L4J1 428 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 CLDN5O00501 218 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 GNB5O14775 395 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 FSCN2O14926 492 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 PAPSS1O43252 624 aaPredicted RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 PSTPIP1O43586 416 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 SASH3O75995 380 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 TUBBP07437 444 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 SETSIPP0DME0 302 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 KRT3P12035 628 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 PTPN1P18031 435 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 ACAT1P24752 427 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 ADORA2BP29275 332 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 RPL34P49207 117 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 PCBP4P57723 403 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 SLC25A11Q02978 314 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 GRIK3Q13003 919 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 TAF5Q15542 800 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 TIGD5Q53EQ6 642 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 GLE1Q53GS7 698 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 SEL1L2Q5TEA6 688 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 OR6B2Q6IFH4 312 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 C8orf74Q6P047 294 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 DCUN1D2Q6PH85 259 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 TMCO3Q6UWJ1 677 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 OLFML1Q6UWY5 402 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 CHSY3Q70JA7 882 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 TMEM110Q86TL2 294 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 KATNAL2Q8IYT4 538 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 FUKQ8N0W3 1084 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 B3GALNT2Q8NCR0 500 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 SLC2A14Q8TDB8 520 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 FNIP1Q8TF40 1166 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 CASKIN2Q8WXE0 1202 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 HNRNPABQ99729 332 aaKnown RBP7.75□□□□□ -1.17
SPG11-204ENST00000557866 RTP3Q9BQQ7 232 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 RNF208Q9H0X6 261 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 SYNCQ9H7C4 482 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 UBN1Q9NPG3 1134 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 CRTAC1Q9NQ79 661 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 KLHL11Q9NVR0 708 aa7.75□□□□□ -1.17
SPG11-204ENST00000557866 ARGLU1Q9NWB6 273 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms