RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 MTHFSP49914 203 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 TIRAPP58753 221 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 VSTM1Q6UX27 236 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.17□□□□□ -1.9
FOXN3-216ENST00000557496 ACRBPQ8NEB7 543 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 HOOK2Q96ED9 719 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 ZFYVE19Q96K21 471 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 HS6ST2Q96MM7 605 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 CAMK1GQ96NX5 476 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 TRMOQ9BU70 441 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 FAM234AQ9H0X4 552 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 ZBTB40Q9NUA8 1239 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 MAFFQ9ULX9 164 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 PAXBP1Q9Y5B6 917 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 HS3ST3B1Q9Y662 390 aa3.17□□□□□ -1.9
FOXN3-216ENST00000557496 CD3EAPO15446 510 aaKnown RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 PHGDHO43175 533 aaKnown RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 TBC1D4O60343 1298 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 AGFG1P52594 562 aaKnown RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 YPEL5P62699 121 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 CFHR3Q02985 330 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 SLC14A1Q13336 389 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 SEMA3AQ14563 771 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 B3GNT9Q6UX72 402 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 ZDHHC24Q6UX98 284 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 KCTD20Q7Z5Y7 419 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 UBE2Q1Q7Z7E8 422 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 PIM3Q86V86 326 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 COL23A1Q86Y22 540 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 PELI3Q8N2H9 469 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 OR56A3Q8NH54 315 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 PPP1R35Q8TAP8 253 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 WIPF2Q8TF74 440 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 SPSB4Q96A44 273 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 EDC3Q96F86 508 aaKnown RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 KAZALD1Q96I82 304 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 AIFM3Q96NN9 605 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 PPP1R9BQ96SB3 815 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 RHOBTB2Q9BYZ6 727 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 ZNF518BQ9C0D4 1074 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 ATP6V0A4Q9HBG4 840 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 NMRK2Q9NPI5 230 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 AASDHPPTQ9NRN7 309 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 MGAT4CQ9UBM8 478 aa3.16□□□□□ -1.9
FOXN3-216ENST00000557496 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.16□□□□□ -1.9
FOXN3-216ENST00000557496 MBD3L4A6NDZ8 208 aaPredicted RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MBD3L3A6NE82 208 aaPredicted RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 GTPBP1O00178 669 aaKnown RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 CLIC1O00299 241 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 TBX3O15119 743 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 CCP110O43303 1012 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 TULP3O75386 442 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 RASAL1O95294 804 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 TNFRSF1BP20333 461 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MCM5P33992 734 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 HSF1Q00613 529 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MTX1Q13505 466 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MFSD13AQ14CX5 517 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 INSCQ1MX18 579 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 SLC9C1Q4G0N8 1177 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 ANO6Q4KMQ2 910 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 CC2D1BQ5T0F9 858 aaKnown RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 CACHD1Q5VU97 1274 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 DLK2Q6UY11 383 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 COLCA1Q6ZS62 124 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MICU3Q86XE3 530 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 CHPFQ8IZ52 775 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 IL31RAQ8NI17 732 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 MPLKIPQ8TAP9 179 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 HIC2Q96JB3 615 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 ZBTB45Q96K62 511 aaPredicted RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 TAAR9Q96RI9 348 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 ACO2Q99798 780 aaKnown RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 HIPK2Q9H2X6 1198 aa3.15□□□□□ -1.91
FOXN3-216ENST00000557496 A1CFQ9NQ94 594 aaKnown RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 PNMA8BQ9ULN7 279 aaPredicted RBP3.15□□□□□ -1.91
FOXN3-216ENST00000557496 LOC102723971A0A1B0GUV8 181 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 TRIM43BA6NCK2 446 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 A8MVJ9 347 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 H7C4K7 107 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 AGPSO00116 658 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 EXOC5O00471 708 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 RRP9O43818 475 aaKnown RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 FGF2P09038 288 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 CT47B1P0C2W7 299 aaPredicted RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 HGFP14210 728 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 KLRC1P26715 233 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 PGDP52209 483 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 DEUP1Q05D60 604 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 ZNF750Q32MQ0 723 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 UBAP2Q5T6F2 1119 aaKnown RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 ZNF549Q6P9A3 640 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 LVRNQ6Q4G3 990 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 RBMXL3Q8N7X1 1067 aaKnown RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 C12orf76Q8N812 135 aaPredicted RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 PNPLA1Q8N8W4 532 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 TRIM43Q96BQ3 446 aaPredicted RBP3.14□□□□□ -1.91
FOXN3-216ENST00000557496 STK32BQ9NY57 414 aa3.14□□□□□ -1.91
FOXN3-216ENST00000557496 ASAP1Q9ULH1 1129 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms