RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 UBE2TQ9NPD8 197 aaPredicted RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 ZNF180Q9UJW8 692 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 RAB26Q9ULW5 256 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 DNM3Q9UQ16 869 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 COL4A1P02462 1669 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 TNRC6CQ9HCJ0 1690 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 CLUHO75153 1309 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 A6NJY4 79 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 TXNDC9O14530 226 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 CYP26A1O43174 497 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 C7P10643 843 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 GAP43P17677 238 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 AOC1P19801 751 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 BGNP21810 368 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 VCPP55072 806 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 MYBPC1Q00872 1141 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 KDSRQ06136 332 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 MORF4L2Q15014 288 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 TRIP10Q15642 601 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 UBE2SQ16763 222 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 ANO5Q75V66 913 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 NLRP4Q96MN2 994 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 C7orf26Q96N11 449 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 APBA2Q99767 749 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 WWP1Q9H0M0 922 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 Q9H521 79 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 BCAS3Q9H6U6 928 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 ALG13Q9NP73 1137 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 PPARGC1AQ9UBK2 798 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 HBS1LQ9Y450 684 aaKnown RBP10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 DTNAQ9Y4J8 743 aa10.89□□□□□ -0.67
SUPT16H-207ENST00000557394 CYP3A7-CYP3A51PA0A087WV96 503 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 WTIPA6NIX2 430 aaPredicted RBP10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 H3BNX3 289 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 MATN2O00339 956 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 ZNF254O75437 659 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 RGS20O76081 388 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 SLC4A1P02730 911 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 RALAP11233 206 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 ATF7P17544 494 aaPredicted RBP10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 CYP3A7P24462 503 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 RPA1P27694 616 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 TCF7P36402 384 aaPredicted RBP10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 STAT3P40763 770 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 SLC18A2Q05940 514 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 LRP8Q14114 963 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 SH2D5Q6ZV89 423 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 PRPF39Q86UA1 669 aaKnown RBP10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 FAM71AQ8IYT1 594 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 DEPTORQ8TB45 409 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 DCAKDQ8WVC6 231 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 ITPKCQ96DU7 683 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 CCT7Q99832 543 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 MRPL1Q9BYD6 325 aaKnown RBP10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 ADAM33Q9BZ11 813 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 IKZF4Q9H2S9 585 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 STK39Q9UEW8 545 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 SORCS3Q9UPU3 1222 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 TIMM22Q9Y584 194 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 FADS3Q9Y5Q0 445 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 MAD1L1Q9Y6D9 718 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 UBE4BO95155 1302 aa10.88□□□□□ -0.67
SUPT16H-207ENST00000557394 DENND3A2RUS2 1198 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 M0QX08 132 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 POLRMTO00411 1230 aaKnown RBP10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 ADCY3O60266 1144 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 SERPINB2P05120 415 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 COL6A2P12110 1019 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 S100A5P33763 92 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 COG7P83436 770 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 BFSP1Q12934 665 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 EFTUD2Q15029 972 aaKnown RBP eCLIP10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 RNASEH2BQ5TBB1 312 aaKnown RBP10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 ESX1Q8N693 406 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 SLC26A7Q8TE54 656 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 STON2Q8WXE9 905 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 RSAD2Q8WXG1 361 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 APOPT1Q96IL0 206 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 GCNAQ96QF7 691 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 ALPK1Q96QP1 1244 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 PAFAH2Q99487 392 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 SHOC2Q9UQ13 582 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 TRIM17Q9Y577 477 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 ZNF536O15090 1300 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 SF3B1O75533 1304 aaKnown RBP eCLIP10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 PRR5-ARHGAP8B1AHC4 643 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 H3BSA7 217 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 P4HA2O15460 535 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 KLHL41O60662 606 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 LPXNO60711 386 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 SERPINA6P08185 405 aa10.87□□□□□ -0.67
SUPT16H-207ENST00000557394 MYL3P08590 195 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms