RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 FAM92AA1XBS5 289 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 TNFRSF10BO14763 440 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 KAT7O95251 611 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 ZDHHC11BP0C7U3 371 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 TNNI1P19237 187 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 MYL6P60660 151 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 IRX4P78413 519 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 STK4Q13043 487 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 CAMK4Q16566 473 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 BMT2Q1RMZ1 405 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 WDR72Q3MJ13 1102 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 HS2ST1Q7LGA3 356 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 C12orf56Q8IXR9 622 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 NUP93Q8N1F7 819 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 ALLCQ8N6M5 410 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 TXNDC5Q8NBS9 432 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 B3GALNT2Q8NCR0 500 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 PLEKHO2Q8TD55 490 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 OVCA2Q8WZ82 227 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 NUP62CLQ9H1M0 184 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 EVLQ9UI08 416 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 MBD1Q9UIS9 605 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 HCN2Q9UL51 889 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 UBE4BO95155 1302 aa11.38□□□□□ -0.59
HNRNPC-230ENST00000557201 TNRC6BQ9UPQ9 1833 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 A8MXQ7 604 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CLIC2O15247 247 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 COCHO43405 550 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 GREM1O60565 184 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 PROS1P07225 676 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 ADH5P11766 374 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CSRP1P21291 193 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 YWHAQP27348 245 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 ATICP31939 592 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 GRIA2P42262 883 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 TNFRSF4P43489 277 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 NOVA1P51513 510 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CYP2J2P51589 502 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 TNNC1P63316 161 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CLDN10P78369 228 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 MAP7D1Q3KQU3 841 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 COBLL1Q53SF7 1204 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 SH3PXD2AQ5TCZ1 1133 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 DAB2IPQ5VWQ8 1189 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 FRMD1Q8N878 549 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 XXYLT1Q8NBI6 393 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 KIAA0895Q8NCT3 520 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 SCAMP5Q8TAC9 235 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 WBP2Q969T9 261 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 OTUB2Q96DC9 234 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 SLITRK1Q96PX8 696 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEM121BQ9BXQ6 578 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 SLC39A2Q9NP94 309 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEM9BQ9NQ34 198 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
HNRNPC-230ENST00000557201 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 HOXC11O43248 304 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 RTN3O95197 1032 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ADH1CP00326 375 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ABL1P00519 1130 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 APODP05090 189 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 MBL2P11226 248 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CEACAM1P13688 526 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 TIE1P35590 1138 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PTGER3P43115 390 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CASP4P49662 377 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PGFP49763 221 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 TUBP50607 506 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CDH8P55286 799 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 KLHL40Q2TBA0 621 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 SKOR2Q2VWA4 1001 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 SPDYCQ5MJ68 293 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 EOGTQ5NDL2 527 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 LY6G5CQ5SRR4 150 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ZNF658Q5TYW1 1059 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PEAR1Q5VY43 1037 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 RBM43Q6ZSC3 357 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 NELFCDQ8IXH7 590 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 TRIML1Q8N9V2 468 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 PDZD8Q8NEN9 1154 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 WHAMMQ8TF30 809 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 TMEM174Q8WUU8 243 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 RLN3Q8WXF3 142 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ERCC4Q92889 916 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 SYAP1Q96A49 352 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 SMYD3Q9H7B4 428 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 CD248Q9HCU0 757 aa11.36□□□□□ -0.59
HNRNPC-230ENST00000557201 ZDHHC4Q9NPG8 344 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms