RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
APEX1-216ENST00000557159 CTDP1Q9Y5B0 961 aaPredicted RBP13.06□□□□□ -0.32
APEX1-216ENST00000557159 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
APEX1-216ENST00000557159 OTOFQ9HC10 1997 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 TCRBV5S1A1TA0A578 114 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 E5RJQ4 531 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SGK1O00141 431 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 COPEO14579 308 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 BAG2O95816 211 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 INHBAP08476 426 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 KRT10P13645 584 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 GARTP22102 1010 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 ACAT1P24752 427 aaKnown RBP13.05□□□□□ -0.32
APEX1-216ENST00000557159 USP46P62068 366 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 ADRM1Q16186 407 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 MSS51Q4VC12 460 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SFT2D3Q587I9 215 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 STXBP5Q5T5C0 1151 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 WDR78Q5VTH9 848 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 PRPF39Q86UA1 669 aaKnown RBP13.05□□□□□ -0.32
APEX1-216ENST00000557159 SLC26A11Q86WA9 606 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 ERO1BQ86YB8 467 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 CRLF3Q8IUI8 442 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 FBXO27Q8NI29 283 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 ACTRT2Q8TDY3 377 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SLC10A4Q96EP9 437 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 SRPK1Q96SB4 655 aaKnown RBP13.05□□□□□ -0.32
APEX1-216ENST00000557159 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
APEX1-216ENST00000557159 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
APEX1-216ENST00000557159 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
APEX1-216ENST00000557159 A6NJR5 290 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 VILLO15195 856 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MAFGO15525 162 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 CALB1P05937 261 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 ACO1P21399 889 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 MMP8P22894 467 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 ABCD1P33897 745 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 INHBCP55103 352 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 BST1Q10588 318 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 HP1BP3Q5SSJ5 553 aaPredicted RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 DDI1Q8WTU0 396 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 CLEC4DQ8WXI8 215 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MPP4Q96JB8 637 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 C11orf70Q9BRQ4 267 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MRPS26Q9BYN8 205 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 IQCGQ9H095 443 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 Q9H521 79 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 ZNF696Q9H7X3 374 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 KCNH7Q9NS40 1196 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 ETNK2Q9NVF9 386 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 THEGQ9P2T0 379 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 DMTF1Q9Y222 760 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 TCRBV9S1A1TA0A576 114 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 GOLGA8RI6L899 631 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 KRT37O76014 449 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 C1QAP02745 245 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 SNRPAP09012 282 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 ARP10275 920 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 CPA2P48052 419 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 OAZ1P54368 228 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 CYLC2Q14093 348 aaPredicted RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 RNF111Q6ZNA4 994 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MIER3Q7Z3K6 550 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 AHI1Q8N157 1196 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 CCDC33Q8N5R6 958 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 TMEM161BQ8NDZ6 487 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 KCNN1Q92952 543 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MRRFQ96E11 262 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 TMEM121Q9BTD3 319 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 THAP1Q9NVV9 213 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 C6orf203Q9P0P8 240 aaPredicted RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 ABT1Q9ULW3 272 aaKnown RBP13.04□□□□□ -0.32
APEX1-216ENST00000557159 RAB26Q9ULW5 256 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 UBIAD1Q9Y5Z9 338 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 MAD1L1Q9Y6D9 718 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 TEX264Q9Y6I9 313 aa13.04□□□□□ -0.32
APEX1-216ENST00000557159 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
APEX1-216ENST00000557159 ARHGAP10A1A4S6 786 aa13.03□□□□□ -0.32
APEX1-216ENST00000557159 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms