RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 SYT2Q8N9I0 419 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF560Q96MR9 790 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 ACBD6Q9BR61 282 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 RNF38Q9H0F5 515 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 FAM124BQ9H5Z6 455 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-224ENST00000557024 PRDM16Q9HAZ2 1276 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 IL21RQ9HBE5 538 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 CD93Q9NPY3 652 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 KIAA1522Q9P206 1035 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-224ENST00000557024 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 CPQQ9Y646 472 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 GON4LQ3T8J9 2241 aa9.94□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF462Q96JM2 2506 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 A0A1W2PQF6 199 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ANKRD63C9JTQ0 380 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 TK2O00142 265 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ZBTB24O43167 697 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 HUS1O60921 280 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 NDUFS2O75306 463 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF217O75362 1048 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 BMP15O95972 392 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ABL1P00519 1130 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 PLA2G4BP0C869 781 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 POLR2BP30876 1174 aaKnown RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ABCG1P45844 678 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 SLC7A9P82251 487 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 MYL7Q01449 175 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ARSHQ5FYA8 562 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 LY6G5CQ5SRR4 150 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 C10orf76Q5T2E6 689 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 TRMT11Q7Z4G4 463 aaKnown RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 OSTM1Q86WC4 334 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 MIB1Q86YT6 1006 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 SCUBE3Q8IX30 993 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF419Q96HQ0 510 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ZDHHC5Q9C0B5 715 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 SLC6A17Q9H1V8 727 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 TOR4AQ9NXH8 423 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 TRPM5Q9NZQ8 1165 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
SYNE2-224ENST00000557024 HCN2Q9UL51 889 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
SYNE2-224ENST00000557024 ASXL3Q9C0F0 2248 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 PTPRDP23468 1912 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF840PA6NDX5 716 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 TRIM24O15164 1050 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ATXN7O15265 892 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ATP2C2O75185 946 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 TULP3O75386 442 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ITGB3P05106 788 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 PFKLP17858 780 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ITPKBP27987 946 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 NTSR1P30989 418 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 PNPLA4P41247 253 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 MAGEA11P43364 429 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 TOB1P50616 345 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 CCDC157Q569K6 752 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 WDR45BQ5MNZ6 344 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 EGFLAMQ63HQ2 1017 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 SCARA3Q6AZY7 606 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 DTHD1Q6ZMT9 781 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ZNF605Q86T29 641 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ADGRF2Q8IZF7 708 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 TMEM86AQ8N2M4 240 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ZCCHC9Q8N567 271 aaKnown RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 MYCT1Q8N699 235 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 KIAA1958Q8N8K9 716 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 TSC1Q92574 1164 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 KCNN1Q92952 543 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 FAM84AQ96KN4 292 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 SPATA17Q96L03 361 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 SPATA32Q96LK8 384 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ACOX2Q99424 681 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 REEP2Q9BRK0 252 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 SCAND2PQ9GZW5 306 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 MIR1-1HGQ9H1L0 117 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 IKZF4Q9H2S9 585 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 GAREM1Q9H706 876 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 KCND2Q9NZV8 630 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 DEC1Q9P2X7 70 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 AGO2Q9UKV8 859 aaKnown RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 AGAP1Q9UPQ3 857 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 FNDC3AQ9Y2H6 1198 aaKnown RBP9.92□□□□□ -0.82
SYNE2-224ENST00000557024 RAI2Q9Y5P3 530 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 ADAMTS9Q9P2N4 1935 aa9.92□□□□□ -0.82
SYNE2-224ENST00000557024 OBSL1O75147 1896 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 GOLGA6L4A6NEF3 574 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 MEI4A8MW99 385 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 CILPO75339 1184 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 DKK1O94907 266 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 FAM13AO94988 1023 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 OLFM2O95897 454 aa9.91□□□□□ -0.82
SYNE2-224ENST00000557024 OAS1P00973 400 aaKnown RBP9.91□□□□□ -0.82
SYNE2-224ENST00000557024 MBL2P11226 248 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-224ENST00000557024 BDNFP23560 247 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms