RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CYP3A43Q9HB55 503 aa11.18□□□□□ -0.62
SPTLC2-205ENST00000556607 APOBEC3GQ9HC16 384 aaKnown RBP11.18□□□□□ -0.62
SPTLC2-205ENST00000556607 TMEM8AQ9HCN3 771 aa11.18□□□□□ -0.62
SPTLC2-205ENST00000556607 ARHGEF4Q9NR80 690 aa11.18□□□□□ -0.62
SPTLC2-205ENST00000556607 INVSQ9Y283 1065 aa11.18□□□□□ -0.62
SPTLC2-205ENST00000556607 FAM186AA6NE01 2351 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 PTPRZ1P23471 2315 aaPredicted RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 MED19A0JLT2 244 aaPredicted RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 K7EQS6 105 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 STX10O60499 249 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 TLR5O60602 858 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 KAT7O95251 611 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 SMC2O95347 1197 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 TGM1P22735 817 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 MXI1P50539 228 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 TUBP50607 506 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 NUCB2P80303 420 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 ELF2Q15723 593 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 LY6G5CQ5SRR4 150 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 ANO7Q6IWH7 933 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 RHBDF2Q6PJF5 856 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 CLEC20AQ6ZU45 233 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 ERCC4Q92889 916 aaPredicted RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 SMARCE1Q969G3 411 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 OTUB2Q96DC9 234 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 TWNKQ96RR1 684 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 CSNK1G1Q9HCP0 422 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 BCCIPQ9P287 314 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 NUDT5Q9UKK9 219 aa11.17□□□□□ -0.62
SPTLC2-205ENST00000556607 TBC1D3BA6NDS4 549 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 ANTXRLA6NF34 631 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 DCLK1O15075 740 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 CYP26A1O43174 497 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 GDF9O60383 454 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 CILPO75339 1184 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 ALDH1A2O94788 518 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 RHOBTB1O94844 696 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 KLF8O95600 359 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 TBX18O95935 607 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 GTF2H1P32780 548 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 PRCPP42785 496 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 MRPS21P82921 87 aaKnown RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 CREB5Q02930 508 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 INCA1Q0VD86 236 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 PREPLQ4J6C6 727 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 USP39Q53GS9 565 aaKnown RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 PPP1R26Q5T8A7 1209 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 ZNF658Q5TYW1 1059 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 EMC10Q5UCC4 262 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 SNX30Q5VWJ9 437 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 ISM2Q6H9L7 571 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 TPGS1Q6ZTW0 290 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 GPRIN1Q7Z2K8 1008 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 C12orf40Q86WS4 652 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 BBS7Q8IWZ6 715 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 PGBD3Q8N328 593 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 KIAA1958Q8N8K9 716 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 TXNDC5Q8NBS9 432 aaKnown RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 FBXL13Q8NEE6 735 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 NETO1Q8TDF5 533 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 USP33Q8TEY7 942 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 POLMQ9NP87 494 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 ZDHHC4Q9NPG8 344 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 SPHK2Q9NRA0 654 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 NAGPAQ9UK23 515 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 LSM7Q9UK45 103 aaKnown RBP11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 MMP17Q9ULZ9 603 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 THADAQ6YHU6 1953 aa11.16□□□□□ -0.62
SPTLC2-205ENST00000556607 A0A1W2PQH9 124 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 NEDD8-MDP1E9PL57 170 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 MDM4O15151 490 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 FOXD2O60548 495 aaPredicted RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 EPN2O95208 641 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 RALAP11233 206 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 RARGP13631 454 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 GRIA2P42262 883 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 PGFP49763 221 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 SLC8A3P57103 927 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 ENPEPQ07075 957 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 STIM1Q13586 685 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 SF3A2Q15428 464 aaKnown RBP11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 CRY1Q16526 586 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 PLK5Q496M5 336 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 C10orf120Q5SQS8 335 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 ANKRD40Q6AI12 368 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 IL31Q6EBC2 164 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 TADA2BQ86TJ2 420 aa11.15□□□□□ -0.62
SPTLC2-205ENST00000556607 TMEM25Q86YD3 366 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms