RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SLC6A17Q9H1V8 727 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 ST6GALNAC4Q9H4F1 302 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 MRPL44Q9H9J2 332 aaKnown RBP14.83□□□□□ -0.04
ACTN1-219ENST00000556432 PDE11AQ9HCR9 933 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 DNAJC17Q9NVM6 304 aaKnown RBP14.83□□□□□ -0.04
ACTN1-219ENST00000556432 TBC1D7Q9P0N9 293 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 SIX4Q9UIU6 781 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 PCOLCE2Q9UKZ9 415 aa14.83□□□□□ -0.04
ACTN1-219ENST00000556432 PLXNB3Q9ULL4 1909 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 TRIM24O15164 1050 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 HOXC11O43248 304 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-219ENST00000556432 LDHAP00338 332 aaKnown RBP14.82□□□□□ -0.04
ACTN1-219ENST00000556432 KCNA1Q09470 495 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 C19orf57Q0VDD7 668 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 DYMQ7RTS9 669 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 ZNF720Q7Z2F6 126 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 MARCH9Q86YJ5 346 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 BBS7Q8IWZ6 715 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 ETFBKMTQ8IXQ9 262 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 ZCCHC9Q8N567 271 aaKnown RBP14.82□□□□□ -0.04
ACTN1-219ENST00000556432 MYCBPAPQ8TBZ2 947 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 KBTBD7Q8WVZ9 684 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 FBXO32Q969P5 355 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 ZNF419Q96HQ0 510 aaPredicted RBP14.82□□□□□ -0.04
ACTN1-219ENST00000556432 C8orf48Q96LL4 319 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 ACOX2Q99424 681 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 SNX25Q9H3E2 840 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 PRDM16Q9HAZ2 1276 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 CD93Q9NPY3 652 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 SPHK2Q9NRA0 654 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 RAD54BQ9Y620 910 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 BPTFQ12830 3046 aa14.82□□□□□ -0.04
ACTN1-219ENST00000556432 A0A1B0GTW7 788 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 COCHO43405 550 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 GCNT3O95395 438 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 CER1O95813 267 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 TNNC2P02585 160 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 PRB1P04280 392 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 YWHAQP27348 245 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 CCDC157Q569K6 752 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 GLRX5Q86SX6 157 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 TMEM25Q86YD3 366 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 CXorf38Q8TB03 319 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 CRELD1Q96HD1 420 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 DCBLD2Q96PD2 775 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 PCIF1Q9H4Z3 704 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 GAREM1Q9H706 876 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 IL21RQ9HBE5 538 aa14.81□□□□□ -0.04
ACTN1-219ENST00000556432 GOLGA4Q13439 2230 aaKnown RBP14.81□□□□□ -0.04
ACTN1-219ENST00000556432 NEDD8-MDP1E9PL57 170 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 CBFA2T3O75081 653 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 WARSP23381 471 aaKnown RBP14.8□□□□□ -0.04
ACTN1-219ENST00000556432 CD6P30203 668 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 MATKP42679 507 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 HECTD3Q5T447 861 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
ACTN1-219ENST00000556432 TMPRSS7Q7RTY8 843 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 PDZD8Q8NEN9 1154 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 RHBDD1Q8TEB9 315 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 MRGPRX1Q96LB2 322 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 CDC6Q99741 560 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 ZNF518BQ9C0D4 1074 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 ELOVL4Q9GZR5 314 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 TM7SF3Q9NS93 570 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 CACNA2D2Q9NY47 1150 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 HCN2Q9UL51 889 aa14.8□□□□□ -0.04
ACTN1-219ENST00000556432 FAM149AA5PLN7 773 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 TRABD2BA6NFA1 517 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 H3BQV1 296 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 CILPO75339 1184 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 PPP1R37O75864 691 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 RTN3O95197 1032 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 ATXN1LP0C7T5 689 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 NCAM1P13591 858 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 CACNA2D1P54289 1103 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 STARD3Q14849 445 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 NUP93Q8N1F7 819 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 GALNT15Q8N3T1 639 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 OR6B3Q8NGW1 331 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 TOE1Q96GM8 510 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 ZFRQ96KR1 1074 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 XPO6Q96QU8 1125 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 UBL7Q96S82 380 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 MRPL45Q9BRJ2 306 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 CBWD1Q9BRT8 395 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 GPR174Q9BXC1 333 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 BBS2Q9BXC9 721 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 INTS13Q9NVM9 706 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 KIAA1522Q9P206 1035 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 DKK4Q9UBT3 224 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 CHORDC1Q9UHD1 332 aaPredicted RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 FNDC3AQ9Y2H6 1198 aaKnown RBP14.79□□□□□ -0.04
ACTN1-219ENST00000556432 STARD13Q9Y3M8 1113 aa14.79□□□□□ -0.04
ACTN1-219ENST00000556432 PTPRBP23467 1997 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 CLDN5O00501 218 aa14.78□□□□□ -0.04
ACTN1-219ENST00000556432 BCAT2O15382 392 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms