RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CYP11A1P05108 521 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 EDN1P05305 212 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 XRCC6P12956 609 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 DRD2P14416 443 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 FOSL1P15407 271 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 GCFC2P16383 781 aaKnown RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 GABRR2P28476 465 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 MARCKSP29966 332 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 ATXN3P54252 364 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 PCDH1Q08174 1060 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 GPR17Q13304 367 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF211Q13398 564 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 NPY5RQ15761 445 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 ADCK5Q3MIX3 580 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 SPDYCQ5MJ68 293 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 NAIF1Q69YI7 327 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 TRIM68Q6AZZ1 485 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 CENPPQ6IPU0 288 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 GALNT17Q6IS24 598 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 LPCAT2Q7L5N7 544 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 RASSF3Q86WH2 238 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC26Q8TAB7 109 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 OLIG1Q8TAK6 271 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 MDM1Q8TC05 714 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 EZH1Q92800 747 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 CNOT6LQ96LI5 555 aaKnown RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 ZMAT2Q96NC0 199 aaKnown RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 PGLYRP2Q96PD5 576 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 POLR3CQ9BUI4 534 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-236ENST00000556220 SLC46A2Q9BY10 475 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 TPSD1Q9BZJ3 242 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 TBX20Q9UMR3 447 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 NUP205Q92621 2012 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 A0A087WWV3 80 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CCNT1O60563 726 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 USO1O60763 962 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 BAG4O95429 457 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CD59P13987 128 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 PLA2G2AP14555 144 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ARSAP15289 507 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 KCNE1P15382 129 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 LIG1P18858 919 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 U2AF2P26368 475 aaKnown RBP eCLIP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CDC25CP30307 473 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 MCM4P33991 863 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 GJA4P35212 333 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 DPP6P42658 865 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 PTGER3P43115 390 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 YARSP54577 528 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CYP4F8P98187 520 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 TRIP6Q15654 476 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 NT5DC1Q5TFE4 455 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ANO7Q6IWH7 933 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CDPF1Q6NVV7 123 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 APBB1IPQ7Z5R6 666 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 NEK8Q86SG6 692 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ITIH5Q86UX2 942 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 SLFN12Q8IYM2 578 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CMTM8Q8IZV2 173 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 PNPLA1Q8N8W4 532 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ATAD1Q8NBU5 361 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 MCPH1Q8NEM0 835 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CEP76Q8TAP6 659 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 PIGOQ8TEQ8 1089 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 FBLIM1Q8WUP2 373 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 BRF1Q92994 677 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CD101Q93033 1021 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC43Q96MW1 224 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 TBC1D32Q96NH3 1257 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 TCF12Q99081 682 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 GTPBP2Q9BX10 602 aaKnown RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC113Q9H0I3 377 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ECT2Q9H8V3 914 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 LIN7BQ9HAP6 207 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 TOPORSQ9NS56 1045 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-236ENST00000556220 DKK4Q9UBT3 224 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 ZMYM5Q9UJ78 669 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 PILRBQ9UKJ0 227 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 NID2Q14112 1375 aa7.45□□□□□ -1.22
ATXN3-236ENST00000556220 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 EML5Q05BV3 1969 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 THADAQ6YHU6 1953 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 A0A087WV48 116 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 OR6C75A6NL08 312 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 M0QZQ0 153 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 SH3BP5O60239 455 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 SERPINF2P08697 491 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 OR4Q2P0C623 313 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 FTH1P19P0C7X4 201 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 HOXD12P35452 270 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 P2RY2P41231 377 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 NAMPTP43490 491 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms