RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 IFRD2Q12894 506 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 ADAM9Q13443 819 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 PLK5Q496M5 336 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 KLHDC10Q6PID8 442 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 KBTBD6Q86V97 674 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 ETFBKMTQ8IXQ9 262 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 ZNF276Q8N554 614 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 CCDC150Q8NCX0 1101 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 TSTD1Q8NFU3 115 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 TAS1R2Q8TE23 839 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 CNOT6LQ96LI5 555 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 NT5C1AQ9BXI3 368 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 GOLPH3LQ9H4A5 285 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 CCSER2Q9H7U1 834 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 GMIPQ9P107 970 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 CHORDC1Q9UHD1 332 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 SCML2Q9UQR0 700 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
HNRNPC-221ENST00000555883 LAMA1P25391 3075 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 HHLA1C9JL84 531 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 STX10O60499 249 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 TLR5O60602 858 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 BEST1O76090 585 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 RHOBTB1O94844 696 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 KAT7O95251 611 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 APODP05090 189 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 KIR2DL1P43626 348 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 GCLMP48507 274 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 PSEN1P49768 467 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 MAP3K7CLP57077 242 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 ELF2Q15723 593 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 CRY1Q16526 586 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 KRT39Q6A163 491 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 SPOPLQ6IQ16 392 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 CLEC20AQ6ZU45 233 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 HTR3DQ70Z44 454 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 PHTF2Q8N3S3 785 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 C12orf29Q8N999 325 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 DUSP15Q9H1R2 295 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 APOBEC3GQ9HC16 384 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 RMND1Q9NWS8 449 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
HNRNPC-221ENST00000555883 GREM1O60565 184 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 TRIM49P0CI25 452 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 TRIM49CP0CI26 452 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 GOLGA8FQ08AF8 430 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 GOLGA8DPQ0D2H9 430 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 USP39Q53GS9 565 aaKnown RBP13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 C2orf27AQ580R0 203 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 LY6G5CQ5SRR4 150 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 BTBD8Q5XKL5 378 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 NUDT18Q6ZVK8 323 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 C12orf50Q8NA57 414 aaPredicted RBP13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 IL17RCQ8NAC3 791 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 SPATA20Q8TB22 786 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 ELMO3Q96BJ8 720 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 CYFIP2Q96F07 1278 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 GSDMAQ96QA5 445 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 TWNKQ96RR1 684 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 NACA2Q9H009 215 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 ARRDC1-AS1Q9H2J1 176 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 SPHK2Q9NRA0 654 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 FAM49BQ9NUQ9 324 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 NCOR2Q9Y618 2525 aa13.41□□□□□ -0.26
HNRNPC-221ENST00000555883 CETN3O15182 167 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 ALDH1A2O94788 518 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 ATP5C1P36542 298 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 MPLP40238 635 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 MXI1P50539 228 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 KIF11P52732 1056 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 ORC1Q13415 861 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 EOGTQ5NDL2 527 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 TRMT11Q7Z4G4 463 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 TADA2BQ86TJ2 420 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 C12orf40Q86WS4 652 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 BBS7Q8IWZ6 715 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 FMR1NBQ8N0W7 255 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 OLIG1Q8TAK6 271 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 CDK5RAP1Q96SZ6 601 aaKnown RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 POLR3BQ9NW08 1133 aaPredicted RBP13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 CLIC5Q9NZA1 410 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 MARK1Q9P0L2 795 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 DEC1Q9P2X7 70 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 STARD13Q9Y3M8 1113 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 USP3Q9Y6I4 520 aa13.4□□□□□ -0.26
HNRNPC-221ENST00000555883 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms